Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03875 ATGTTTGATAAGTTCATCCATTTGCTGAGTCATGAGTTTGTTCTGAGCTATAATGCTGATGATGCATGTAAATATGATTCTAAACATGATCAACTTTCCCTGGACGTGAAGAAGATGGAAAGCAACAATTCTAGTCGTAAAGAGAAACACAATAATATTAGTTCAGATAAAGTCAAAGTTGATTTGAATTTGAATGTGAGTGAGAAAAGGGAAGATGATTCCAAACACGATCAACTTTGGTTGGACGTGAAGAATTTTAATTTAAAAGACGGGGTTTGCACGTATGAAAAAGTCGCAAAGAAATTTACTTTTGATGAGCTTGCAGCTGCAACAAAGAATTTTAGAAGGAGGGTTTGGCAAGAACCCCCAAATCTTGTCAAGTTATTAGGATTTTGTGCTGAGGGAGAGCAGAGGCTTTTGGTTTATGAGTACATGCCTTTGGGATCTTTGGAGAATCATTTGCATGCTAAAGGTTTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTCATATACCGTGACCTCAAATGCTCCAACATTTTGTTAGGCGGCGATTATCATCCCAAGTTATCTGATTTTGGCTTGGCAAAAGTAGGTCCAATCGGTGATATGACTCATGTTTCAACAAGAGTTATGGGAACATATGGCTACTGTGCTCCAGATTACGCAATGACGGGTCAATTGACGTTCAAGTCTGACATTTATAGCTTTGGAGTTGCTCTTTTGGAGCTCATCACAGGCAGAAAGGCCTTCGACCAAAGTAAACCTGCTAAAGAACAAAATCTTGTCGCATGGGCAAGTCCATTATTCAAAGACCAAAGAAACTTCTCAAAGATGGTTGATCCATTGCTTGAAGGTCAATATCCAGCGAGGGGTATGTACCAAGCTCTTGCTGTTGCTGCTATGTGTGTTGAAGAGCAGTCTAGTATGCGGCCGGTTATAGCAGATGTGGTTGCAGCTCTAAATTACATTTCTTCACAAAAGTATGATCCGCAAGTTCATCCAATACAAAGCTCGAGATAA 1023 0.3969 MFDKFIHLLSHEFVLSYNADDACKYDSKHDQLSLDVKKMESNNSSRKEKHNNISSDKVKVDLNLNVSEKREDDSKHDQLWLDVKNFNLKDGVCTYEKVAKKFTFDELAAATKNFRRRVWQEPPNLVKLLGFCAEGEQRLLVYEYMPLGSLENHLHAKGLEYLHDKMKPPVIYRDLKCSNILLGGDYHPKLSDFGLAKVGPIGDMTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVALLELITGRKAFDQSKPAKEQNLVAWASPLFKDQRNFSKMVDPLLEGQYPARGMYQALAVAAMCVEEQSSMRPVIADVVAALNYISSQKYDPQVHPIQSSR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03875 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Mepo6g03875 340 Gene3D Phosphorylase Kinase; domain 1 90 145 - -
Mepo6g03875 340 PANTHER OS07G0668900 PROTEIN 123 332 - -
Mepo6g03875 340 SMART serkin_6 17 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03875 340 Pfam Protein kinase domain 122 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03875 340 SUPERFAMILY Protein kinase-like (PK-like) 118 321 IPR011009 -
Mepo6g03875 340 FunFam Serine/threonine-protein kinase PBS1 153 339 - -
Mepo6g03875 340 ProSiteProfiles Protein kinase domain profile. 2 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03875 340 Gene3D Transferase(Phosphotransferase) domain 1 146 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03875 Mepo-Chr6 51017567 51020618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03875 87 326 Glycoside Hydrolase AT3G07070 47.557 1.06e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo6g03875 Pkinase 6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03875 - - mtr:11419113 532.717