Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03874 ATGAGTTGTTTTCGTTTCAAAGCCAAATCACGAGGAAAGATCGAAAGCAATCATTCTAGCCGTAGTGAGGACCACAGTAATACCAGTTCAGCTGATAAGGTCAAAGTTAATTTGAATTTGAATTTGAGTGAGTTGAAAGATAAAAAGGAAGATGATTCTAAACATGATCAACTTTCCTTGGACGTGAAGAATTTGAATTTAAACGACGGGGTTTCACCGGATGGAAAAGTTGCACAGACATTTACTTTTGCTGAGCTTGCAGCTGCGACTGAGAATTTTAGGGCAGATTGCTTTGTTGGTGAAGGAGGGTTTGGAAAGGTTTATAAGGGTTACCTCGAGAAAATTAATCAGGTTGTTGCAATAAAGCAACTTGATCGAAATGGGGTTCAAGGAATCAGGGAATTTGTTGTTGAAGTGATAACACTAAGTTTAGCAGACCACCCAAATCTTGTCAAGTTATTAGGGTTTTGTGCGGAAGGCGAGCAAAGACTATTGGTTTATGAGTACATGCCATTGGGATCATTGGAGAACCATTTGCATGATCTTTCGCCCGGACAAAAACCACTGGATTGGAACACAAGAATGAAAATAGCTGCTGGTGCAGCCAGGGGATTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTTATATACCGCGACCTCAAATGCTCCAACATTTTGTTAGGTGAGGATTATCATTCCAAGTTGTCTGATTTTGGCCTGGCAAAAGTAGGTCCAATCGGTGATAAGACCCATGTTTCGACAAGAGTTATGGGAACATATGGGTACTGTGCTCCAGATTACGCAATGACAGGTCAATTGACGTTCAAGTCTGACATTTATAGCTTTGGAGTTGCTCTTTTGGAGCTCATTACAGGCAGAAAGGCCATTGATCATAGAAAACCTGCTAAAGAACAAAATCTAGTTGCATGGGCAAGGCCATTATTCAGAGACCGAAGAAGATTCTCCGAAATGATAGATCCATTGCTTGAAGGTCAATATCCAGTGAGGGGTTTGTACCAAGCTCTTGCTATTGCTGCTATGTGTGTTCAAGAGCAGCCTAATATGCGGCCGGTTATAGCCGATGTGGTCACAGCTCTAAATTACCTTGCTTCACAAAAATATGATCCGCAAATTCATCATATACAAGGCTCGAGAAAAGGTTCATCTTCTCCAAGAAGTAGGACTGAACGTCATAGACGTGTTACTAGCAAGGACTCTGAGACAGACAGATTTGGAGATTAG 1245 0.4137 MSCFRFKAKSRGKIESNHSSRSEDHSNTSSADKVKVNLNLNLSELKDKKEDDSKHDQLSLDVKNLNLNDGVSPDGKVAQTFTFAELAAATENFRADCFVGEGGFGKVYKGYLEKINQVVAIKQLDRNGVQGIREFVVEVITLSLADHPNLVKLLGFCAEGEQRLLVYEYMPLGSLENHLHDLSPGQKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEDYHSKLSDFGLAKVGPIGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVALLELITGRKAIDHRKPAKEQNLVAWARPLFRDRRRFSEMIDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVIADVVTALNYLASQKYDPQIHHIQGSRKGSSSPRSRTERHRRVTSKDSETDRFGD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03874 414 FunFam probable serine/threonine-protein kinase RLCKVII 66 169 - -
Mepo6g03874 414 Pfam Protein kinase domain 98 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03874 414 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Mepo6g03874 414 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03874 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Mepo6g03874 414 MobiDBLite consensus disorder prediction 380 414 - -
Mepo6g03874 414 MobiDBLite consensus disorder prediction 391 414 - -
Mepo6g03874 414 MobiDBLite consensus disorder prediction 8 30 - -
Mepo6g03874 414 SUPERFAMILY Protein kinase-like (PK-like) 80 383 IPR011009 -
Mepo6g03874 414 CDD STKc_IRAK 99 368 - -
Mepo6g03874 414 SMART serkin_6 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03874 414 PANTHER OS07G0668900 PROTEIN 26 378 - -
Mepo6g03874 414 FunFam Serine/threonine-protein kinase PBS1 170 385 - -
Mepo6g03874 414 Gene3D Phosphorylase Kinase; domain 1 78 169 - -
Mepo6g03874 414 Gene3D Transferase(Phosphotransferase) domain 1 170 387 - -
Mepo6g03874 414 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03874 Mepo-Chr6 51011945 51015394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03874 1 372 Glycoside Hydrolase AT3G07070 56.452 4.95e-151 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo6g03874 Pkinase 7.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03874 - - gmx:100794680 626.706