Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03864 ATGGGAAGAGCTCCTTGCTGTGACAAAGCAAATGTGAAGAAAGGACCATGGTCTCCAGAAGAAGATACAAAGCTCAAAGAGTATATAGAAAAACATGGAACTGGTGGAAATTGGATTTCTCTTCCTCAAAAAGCTGGTCTAAGGAGATGTGGAAAAAGTTGTAGATTGAGATGGCTTAACTATTTAAGGCCAAACATTAAGCATGGAGAATTTTCAGATGAAGAAGACAGAATCATTTGCACTCTTTATGCTAATATTGGAAGCAGGTGGTCAATTATAGCTGCTCAATTACCTGGAAGAACTGATAATGATATCAAAAACTACTGGAACACAAAACTAAAGAAGAAACTCATGAATCTTCTTCCTCAATCTCATAGCACAGTCTTACCTTATCTAACCTCTTCTTCATTTCCTTCTCATTGCACCTCCTATTACAACCAAACACCAACAAACACATCTTTCACAACATCTCTTGAACAACAATTTTCTGTTCCTTCATCAAGTAACTCAATCTCTCTCCCTTTTTACCATAACCAAGAGTCCTTACTCAATGGTTTTAGTAGTAATACTAATACTACTTCCATGCAATATCAAAACCCTATGATGAAAGAAAGTCTTGTCATGTTTGGAAGTGATGGAAGTTGTTGCAGTTCATCTGATGGAAGTCTTGGGAAACAAGAAGAAATAATGGGGTTTCAGAATTTCATGCAAATCAACAAGTTCAATCTTAGTCATGGAAGTGATGTTGTTGATGTTAACCAATGGGAAAGAGAAAAGGTGAATTTATGCTTTAGTCAAAATCAAAAGGAAATTACTACTACACCTTTGGATTATGATCTTGAGTATATTAAGCAATTAATTAGTAGTAATAGTGGTAGTTGTAATAATGGTTACTTGAGTATTGATGAAAACAAGATGGAGGAGAAGACTATGTACTATTACTGA 945 0.3513 MGRAPCCDKANVKKGPWSPEEDTKLKEYIEKHGTGGNWISLPQKAGLRRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICTLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMNLLPQSHSTVLPYLTSSSFPSHCTSYYNQTPTNTSFTTSLEQQFSVPSSSNSISLPFYHNQESLLNGFSSNTNTTSMQYQNPMMKESLVMFGSDGSCCSSSDGSLGKQEEIMGFQNFMQINKFNLSHGSDVVDVNQWEREKVNLCFSQNQKEITTTPLDYDLEYIKQLISSNSGSCNNGYLSIDENKMEEKTMYYY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03864 314 CDD SANT 70 111 IPR001005 -
Mepo6g03864 314 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mepo6g03864 314 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mepo6g03864 314 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mepo6g03864 314 SMART sant 13 64 IPR001005 -
Mepo6g03864 314 SMART sant 67 115 IPR001005 -
Mepo6g03864 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mepo6g03864 314 CDD SANT 16 62 IPR001005 -
Mepo6g03864 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mepo6g03864 314 PANTHER OS09G0431300 PROTEIN 1 254 - -
Mepo6g03864 314 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mepo6g03864 314 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mepo6g03864 314 FunFam Transcription factor RAX3 7 68 - -
Mepo6g03864 314 Gene3D - 7 68 - -
Mepo6g03864 314 Gene3D - 69 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03864 Mepo-Chr6 50909421 50911152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03864 1 118 MYB Transcription Factor Family AT5G57620 88.136 4.06e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo6g03864 Myb_DNA-binding 8.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03864 K09422 - gmx:100796382 348.977