Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03861 ATGGTTTCTGAAGCTAGCAAGAAAAAAGCTGCTCAGAAGAAGGCTGCCGCCGCCGCAAAGAGAGGTGGGAAGGTTGCCGCCACCGCCGCTTCATCGAAAAAGGCGGTGGATAGTGTTGCTAACGGAATTGGGGATATTCAGATATCTGATCGGACATGCACTGGTGTTCTATGTTCTCATCCTCTTTCTAGGGATATTCGGATAGAATCTTTATCAGTTACTTTCCATGGACATGATCTAATAGTTGATTCTGAGTTGGAGCTAAATTATGGAAGACGTTATGGTTTGCTTGGATTGAACGGCTGTGGAAAGTCTACGCTACTTACGGCAATAGGTTGCCGTGAGCTTCCTATTCCAGACCACATGGATATTTATCACCTTAGCCGGGAAATTGAAGCCTCTGGCATGTCTGCGTTGGAGGCTGTCATTAGTTGTGACGAGGAAAGGTTGAAATTGGAGAAAGAAGCTGAAATTCTTGGAGCACAGGAAGATGGTGGTGGTGAAGCACTTGAACGAGTTTTTGAACGGCTGGAAGCTATGGATGCATCAACTGCCGAAAAGCGTGCTGCTGAAATTTTATTTGGTCTTGGTTTCAACAAGCAGATGCAGGCAAAGAAGACACGTGATTTTTCTGGTGGATGGAGAATGAGGATTGCTTTAGCACGAGCCCTGTTTATGAACCCAACCATTCTTCTACTTGATGAACCAACCAATCACCTTGATTTGGAAGCATGTGTGTGGCTGGAGGAGAATTTGAAGAAGTTTGACCGTATTTTGGTTGTGATTTCACACTCCCAAGATTTCCTTAATGGTGTCTGCACAAATATCATCCACATGCAAAACAAAAAGCTGAAGTTCTATACTGGTAATTATGATCAATATGTTCAGACACGTGCTGAACTGGAAGAGAACCAGATGAAGCAGTACAGGTGGGAGCAGGAGCAGATTGCCTCAATGAAGGAATACATTGCACGATTTGGCCATGGATCAGCAAAACTAGCTCGCCAAGCTCAGAGTAAAGAGAAGACTCTTGCAAAAATGGAGCGCGGTGGACTTACAGAGAAGGTGGTAAGAGACAAAATTTTAGTTTTCCGCTTTGTTGATGTGGGGAAACTTCCCCCACCTGTTCTCCAGTTTGTGGAGGTGACATTTGGCTACACTCCTGATAATCTCATCTACAAGAACATCGACTTTGGGGTCGATTTAGACTCCAGGATTGCTCTGGTTGGACCCAATGGAGCTGGGAAGAGCACGTTCCTGAAGCTTATGACCGGTGATTTGGTTCCTTTAGATGGCATGGTTCGTCGCCATAATCACCTTCGCATTGCACAATTTCACCAGCACTTGACTGAAAAACTAGACTTGGAACTGTCTGCTCTCCAGTTTATGATAAAAGAGTACCCTGGAAATGAGGAAGAAAGGATGAGAGCAGCTATTGGGAAGTTTGGATTGTCGGGTAAAGCACAGGTGATGCCTATGAGAAATTTATCGGATGGACAAAGGAGTCGCGTGATCTTTGCATGGTTAGCCTATAGACAGCCTCACTTGCTACTATTAGATGAACCAACTAATCATTTAGATATCGAGACAATTGACTCGTTAGCCGAGGCATTAAATGAATGGGATGGTGGTATGGTTCTAGTCAGTCATGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTGTGTGCTGATCAAACAGTGACCAGATGGGAAGGTGATATTATGGATTTCAAGCTGCATCTAAAGGAAAAGGCGGGTTTATCTGACTGA 1779 0.4446 MVSEASKKKAAQKKAAAAAKRGGKVAATAASSKKAVDSVANGIGDIQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASGMSALEAVISCDEERLKLEKEAEILGAQEDGGGEALERVFERLEAMDASTAEKRAAEILFGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNYDQYVQTRAELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDKILVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAGKSTFLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLELSALQFMIKEYPGNEEERMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQTVTRWEGDIMDFKLHLKEKAGLSD 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03861 592 CDD ABCF_EF-3 377 569 - -
Mepo6g03861 592 FunFam Abc transporter f family member 1 66 330 - -
Mepo6g03861 592 Pfam ABC transporter 84 238 IPR003439 GO:0005524
Mepo6g03861 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 308 IPR027417 -
Mepo6g03861 592 ProSitePatterns ABC transporters family signature. 210 224 IPR017871 GO:0005524|GO:0016887
Mepo6g03861 592 Gene3D - 353 590 IPR027417 -
Mepo6g03861 592 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 66 306 IPR003439 GO:0005524
Mepo6g03861 592 FunFam ATP-binding cassette sub-family F member 3 337 591 - -
Mepo6g03861 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 571 IPR027417 -
Mepo6g03861 592 Pfam ABC transporter 277 349 IPR032781 -
Mepo6g03861 592 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 37 587 - -
Mepo6g03861 592 CDD ABCF_EF-3 66 283 - -
Mepo6g03861 592 Pfam ABC transporter 393 524 IPR003439 GO:0005524
Mepo6g03861 592 Coils Coil 284 304 - -
Mepo6g03861 592 SMART AAA_5 402 589 IPR003593 GO:0016887
Mepo6g03861 592 SMART AAA_5 90 292 IPR003593 GO:0016887
Mepo6g03861 592 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 377 592 IPR003439 GO:0005524
Mepo6g03861 592 Gene3D - 66 330 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03861 Mepo-Chr6 50834833 50838849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03861 377 570 Calmodulin-binding Proteins AT2G36910 26.316 9.51e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03861 K06185 - gmx:100785099 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03861 6 50834833 50838849 Mepo6g03861 6 50834833 50838849 ECH
Mepo6g03861 6 50834833 50838849 Mepo2g01829 2 26832803 26837503 PCT