Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03860 ATGGCCATGTTCAGTGTGAGAAGCATCAACAAAAAGAATGGTGGAGGTGGCATTGTTAAGCTCATTGAGAAGCTACAGAAGAAAATTGTAATAGGGAGAAACAAATCAACATCAACCTATGTGCCAGAAGATGTGAAGGAAGGACATTTTGCTGTGATTGCTAAGGGTAGGAAGGAAGAAGAAGCAAAGAGATTTGTGTTGCCATTAAGCTGTTTAACTAATCCAACATTTGTGAGGCTATTGGAGAAAACAGAAGAAGAGTATGGTTTTGATCATGAAGGTGCCCTAACCATTCCTTGCAAGCCTAGTGAACTTCACAAGATGTTGCAACAGCAATGGCAAAAACAAGAGGGAGGTGCTGAAATTAACTGCTACAACATGCAATTCCTTCAATAA 396 0.399 MAMFSVRSINKKNGGGGIVKLIEKLQKKIVIGRNKSTSTYVPEDVKEGHFAVIAKGRKEEEAKRFVLPLSCLTNPTFVRLLEKTEEEYGFDHEGALTIPCKPSELHKMLQQQWQKQEGGAEINCYNMQFLQ 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03860 131 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 108 IPR003676 GO:0009733
Mepo6g03860 131 Pfam Auxin responsive protein 33 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03860 Mepo-Chr6 50832028 50832595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03860 42 121 Calmodulin-binding Proteins AT3G43120 42.683 5.59e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03860 - K14488 cam:101506786 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03860 6 50832028 50832595 Mepo6g03860 6 50832028 50832595 ECH
Mepo6g03860 6 50832028 50832595 Mepo2g01832 2 26854773 26855126 PCT