Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03857 ATGGCTCAACCTGAATCATCATCGGACTCGAAATCAGGGAAGAAGGACTTCTCCACCGCGATTCTGGAACGTAAGAAATCGCCGAACCGCCTTGTGGTAGATGAGGCGGTTAACGATGACAACTCTGTTGTTGCCATGCACCCTGAAACCATGGAAAAGTTGGGGCTTTTCCGTGGTGATACTATCCTTATCAAGGGAAAGAAAAGGAAGGATACTGTTTGTATTGCTCTCGCTGATGACACCTGTGAAGAGCCTAGGATTAGGATGAACAAAATTGTGAGGTCAAATTTGCGTGTTCGGCTTGGAGATGTTGTGTCTGTGCATCAGTGTCCTGATGTCAAGTATGGTAAACGTGTGCACATTCTGCCCGTTGATGATACCATCGAGGGCCTCACTGGCAATCTATTTGATGCTTTCTTGAAACTGGTTGCTGGGACAAGGCTATTTTTCTTGCGGCCTGAAGTGTGCCGGAGAGGGAGCAGTGTTGGGGATGCTGGTGGTGCTGCTGACAGAGTTCTAAATCAACTTCTGACAGAAATGGATGGCATGTCTGCTAAAAAGACCGTGTTCATTATCGGGGCAACTAACAGACCTGACATCATTGATCCCGCACTCCTTCGGCCAGGCCGTTTAGATCAGTTGATCTATATTCCTCTTCCTGACGAGGATTCCCGTCATTCGATCTTCAAGTCCTGTTTGAGAAAGTCACCGATCGCGAAAAATGTTGATTTGGGAGCATTGGCTAGGCATACTCAAGGTTTTAGTGGCGCCGACATTACAGAAATATGCCAGCGAGCATGCAAATATGCTATTAGAGAAAACATAGAGAAGGACATAGAGCAAGAGAGGAAGAGGAAGGAAAACCCTGAGGCGATGGATGAAGACATGGTTGACGAAGAAGTTGCGGAGATCAAGGCGGCTCACTTTGAGGAGTCGATGAAGTACGCCCGCAGGAGTGTCAGCGATGCAGATATACGCAAATATCAGGCATTTGCTCAGACTTTACAACAATCTAGAGGTTTCGGAAGTGAATTTAGATTTGCAGATAGCGCAAATAGGACTACTGCATCTGATCCTTTTGCAACTACCACTGCAGCTGGTGGGGCTGATGAAGATGACCTGTATAATTAG 1131 0.4677 MAQPESSSDSKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVAMHPETMEKLGLFRGDTILIKGKKRKDTVCIALADDTCEEPRIRMNKIVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPVDDTIEGLTGNLFDAFLKLVAGTRLFFLRPEVCRRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHSIFKSCLRKSPIAKNVDLGALARHTQGFSGADITEICQRACKYAIRENIEKDIEQERKRKENPEAMDEDMVDEEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFADSANRTTASDPFATTTAAGGADEDDLYN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03857 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 333 IPR027417 -
Mepo6g03857 376 PANTHER AAA-FAMILY ATPASE 21 135 - -
Mepo6g03857 376 Gene3D - 113 143 - -
Mepo6g03857 376 Gene3D - 7 112 - -
Mepo6g03857 376 MobiDBLite consensus disorder prediction 1 22 - -
Mepo6g03857 376 MobiDBLite consensus disorder prediction 352 376 - -
Mepo6g03857 376 Pfam AAA+ lid domain 241 282 IPR041569 -
Mepo6g03857 376 Gene3D - 223 332 - -
Mepo6g03857 376 FunFam Transitional endoplasmic reticulum ATPase 7 112 - -
Mepo6g03857 376 Gene3D - 147 219 IPR027417 -
Mepo6g03857 376 Pfam ATPase family associated with various cellular activities (AAA) 163 219 IPR003959 GO:0005524|GO:0016887
Mepo6g03857 376 SMART CDC48_N_2 30 113 IPR003338 -
Mepo6g03857 376 ProSitePatterns AAA-protein family signature. 189 207 IPR003960 GO:0005524|GO:0016887
Mepo6g03857 376 SUPERFAMILY ADC-like 26 110 IPR009010 -
Mepo6g03857 376 Pfam Cell division protein 48 (CDC48), N-terminal domain 30 111 IPR003338 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03857 Mepo-Chr6 50786348 50791571 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03857 164 278 Calmodulin-binding Proteins AT3G56690 46.957 4.45e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03857 K13525 - gmx:100783508 373.244