Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03852 ATGGATGGGCTAAAATCTCGTGCTCATGTTATTGTCATGGGGGCCACTAATCGCCCCAATAGCATTGACCCGGCATTGAGAAGGTTTGGTAGATTGGATAGGGAAATCGATATTGGTGTTCCAGATGAAATTGGGCGACTTGAAGTCCTTCGCATACATACCAAAAACATGAAGCTCTCTGATGATGTTGATTTGGAGAGAATTTCAAAAAATACTCATGGGTATGTTGGTGCTGACCTTGCTGCTCTTTGCACTGAAGCTGCTTTGCAATGCATTAGGGAGAAGATGGACGTTGTTGAGGTGCCTAATGTCAGCTGGGAGGACATCGGAGGCCTTGCGAATGTCAAGCGTGAACTGCAAGAGACTGTTCAATATCCGGTTGAGCACTCGGAAAAGTTTGAGAAGTTTGGGATGTCACCATCAAAAGGAGTTCTCTTCTATGGTCCTCCGGGATGTGGAAAAACTTTGTTAGCCAAAGCAATTGCTAATGAATGTCAAGCTAACTTCATAAGTATAAAAGGCCCAGAATTACTTACAACGTGGTTTGGTGAGAGTGAAGCCAATGTTAGGGAAATTTTTGACAAGGCTAGACAATCAGCTCCATGTGTCCTCTTTTTTGATGAGCTTGATTCCATTGCCACTCAGAGAGGGAGCAGTGTTGGGGATGCTGGTGGCGCCGCTGATAGAGTTCTAAATCAACTTCTGACAGAAATGGATGGCATGTCTGCCAAAAAGACTGTATTCATTATTGGGGCAACTAACAGACCTGACATCATTGATCCAGCACTTCTTCGGCCAAGCCGTCTAGATCAGTTGATCTATATTCCTCTACCTGACGAGGATTCCCGTCATTCGATCTTCAAGTCTTGCATGAGAAAGTCACCGATTGCGAAAAATGTTGATTTGGGAGCATTGGCTAGGCATACTCAAGAAATATGCCAGCGAGCATGCAAATATGCTATTAGAGAAAACATAGAGAAGGACATAGAGCAAGAGAGGAAGAGGAAGGAAAACCCTGAGGGCATGGATGAAGACTTGGTCGACGAAGAAGTTGCAGAGATTAAAGCTGCTCATTTTGAGGAGTCCATGAAGTATGCACGTAGGAGTGTCAGTGATGCTGATATACGCAAATATCAAGCATTTGCTCAGACCCTACAACAATCAAGGGGATTCGGAAGTGAATTTAGATTTTCAAATACCGCAACTAGTTCTACTGTATCTGACCACCTTGCAACTACTACTGGAGGGGATGATGAAGATGATCTGTATAGTTAG 1275 0.4392 MDGLKSRAHVIVMGATNRPNSIDPALRRFGRLDREIDIGVPDEIGRLEVLRIHTKNMKLSDDVDLERISKNTHGYVGADLAALCTEAALQCIREKMDVVEVPNVSWEDIGGLANVKRELQETVQYPVEHSEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTTWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPSRLDQLIYIPLPDEDSRHSIFKSCMRKSPIAKNVDLGALARHTQEICQRACKYAIRENIEKDIEQERKRKENPEGMDEDLVDEEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSNTATSSTVSDHLATTTGGDDEDDLYS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03852 424 ProSitePatterns AAA-protein family signature. 247 265 IPR003960 GO:0005524|GO:0016887
Mepo6g03852 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 383 IPR027417 -
Mepo6g03852 424 MobiDBLite consensus disorder prediction 400 424 - -
Mepo6g03852 424 FunFam Transitional endoplasmic reticulum ATPase 92 277 - -
Mepo6g03852 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 100 IPR027417 -
Mepo6g03852 424 PANTHER AAA-FAMILY ATPASE 98 388 - -
Mepo6g03852 424 Gene3D - 105 379 IPR027417 -
Mepo6g03852 424 Gene3D - 278 364 - -
Mepo6g03852 424 FunFam Bromodomain protein 1 40 - -
Mepo6g03852 424 CDD RecA-like_CDC48_r2-like 115 275 - -
Mepo6g03852 424 SMART AAA_5 140 279 IPR003593 GO:0016887
Mepo6g03852 424 ProSitePatterns AAA-protein family signature. 10 28 IPR003960 GO:0005524|GO:0016887
Mepo6g03852 424 Gene3D - 1 41 IPR027417 -
Mepo6g03852 424 FunFam Cell division cycle protein 48 homologue 41 116 - -
Mepo6g03852 424 Gene3D - 42 104 - -
Mepo6g03852 424 Pfam AAA+ lid domain 62 100 IPR041569 -
Mepo6g03852 424 Pfam ATPase family associated with various cellular activities (AAA) 144 277 IPR003959 GO:0005524|GO:0016887
Mepo6g03852 424 Pfam ATPase family associated with various cellular activities (AAA) 1 39 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03852 Mepo-Chr6 50711954 50715587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03852 1 97 Calmodulin-binding Proteins AT3G56690 52.041 6.67e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03852 K13525 - gmx:100783508 748.043