Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03850 ATGGCCATCAACGCCTCCACCCCAAAATCAACAACTCCACGCTCCAAACGCACCACCCAAACACCCACAACACCATCATCATCATCATCGCCTAAACCCACACGTGCAAGTACCACAACCACACGTGCAACCACTAAAACAAAAACATCATCATTCTCCGACAACCCTTCAACCTCATACGCCGGTTCAACCGGTTCTACCGGGTTCCATCTCTCAACCGACACATCAATCTCAAGCAGAACATCCTTAACCTCTCTTCGGAACACACTCCCAGAAAACCCAAACATCTACGACTTCTCCGAAATCTGTTCCGCCACAAACAACTTCCTCTCCAAACGCTACTCTTCCTCTACACCATGCTGGCGATGCACCTTACGTAACGCTGACGTCATCATCTTCCAACGCAAATTCCGTCGCAAACTTCAAACCCAACAGCTCCAAGAGCTTCTCTCCACCATCTGTCGCAGCCACCACGTCAGCATCGTGAAACTCCTCGGAGTTTCAATCTCCGGTGAACATATCTACCTTGTTTACGAATTCGTTAACGGTGCGAATCTTTCTCATTGTTTACGAAATTCAAGAAACGTTCATTACACTGTTCTTTCGACGTGGATTTCGAGAATGCAAGTTGCGACGGATCTTGCTCATGGAATTGATTATATTCATAATAAAACTGGTTTGAATTTTAATTTTGTTCATAATCATATCAAGAGTAGTGCGATTGTTGTTACTGAACCGGAATTCAATGCTAGGGTTTGTCATTTCGGTGCTGCACAGTTATGCGGTGAAGCCGTTGAAATTGATTCAAAAAATTTAGGAGAAATCACTGAGGAAGAAGATAGATCGGTTAGATCGAAGGAATTTGAAGGTGTGAGAGGTTATATGTCGCCGGAGTTTCAAGCCACCGGCGTCGCGACGCAGAAGACTGATGTATATGCATTTGGAGTGGTGATGTTGGAGCTTTTGTCTGGTGAGGAACCGTTGAAGTTTAGGTTTGATGACAAGAGGCGTGAATTTGTGAGAATTTCGATAATTGAGTCAGCTAAGGAGGCCGTCGCCGCCGTGGACGGCGGCAGAGAAGGCGGCGACGGTGGTGTGGCAGGGAAGCTGAGAATGTGGGTGGATAGAAGGTTGAAAGATTCGTTTCCAGTGGATGTTGCTGAGAAGCTGACACGTGTAGCGTTGGATTGTGTACACGTGGATCCAGATAAGAGGCCTAATATGGGACGCGTTGCAGGGAAAATCTCGACGCTTTATTTGAAATCAAAGAATTGGTCTGACAACATGAAATTGCCTGACATGTCTTTTTCATTGGGTCCTCGATGA 1326 0.4608 MAINASTPKSTTPRSKRTTQTPTTPSSSSSPKPTRASTTTTRATTKTKTSSFSDNPSTSYAGSTGSTGFHLSTDTSISSRTSLTSLRNTLPENPNIYDFSEICSATNNFLSKRYSSSTPCWRCTLRNADVIIFQRKFRRKLQTQQLQELLSTICRSHHVSIVKLLGVSISGEHIYLVYEFVNGANLSHCLRNSRNVHYTVLSTWISRMQVATDLAHGIDYIHNKTGLNFNFVHNHIKSSAIVVTEPEFNARVCHFGAAQLCGEAVEIDSKNLGEITEEEDRSVRSKEFEGVRGYMSPEFQATGVATQKTDVYAFGVVMLELLSGEEPLKFRFDDKRREFVRISIIESAKEAVAAVDGGREGGDGGVAGKLRMWVDRRLKDSFPVDVAEKLTRVALDCVHVDPDKRPNMGRVAGKISTLYLKSKNWSDNMKLPDMSFSLGPR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03850 441 Gene3D Transferase(Phosphotransferase) domain 1 182 433 - -
Mepo6g03850 441 ProSiteProfiles Protein kinase domain profile. 99 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03850 441 Gene3D Phosphorylase Kinase; domain 1 71 180 - -
Mepo6g03850 441 SUPERFAMILY Protein kinase-like (PK-like) 120 411 IPR011009 -
Mepo6g03850 441 MobiDBLite consensus disorder prediction 1 66 - -
Mepo6g03850 441 PANTHER OS09G0572100 PROTEIN 16 441 - -
Mepo6g03850 441 Pfam Protein kinase domain 139 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03850 Mepo-Chr6 50705404 50707022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03850 92 425 Receptor kinase-like Gene Family AT1G51940 29.970 1.48e-38 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mepo6g03850 Pkinase 2.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03850 - - gmx:100792694 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03850 6 50705404 50707022 Mepo6g03850 6 50705404 50707022 ECH