Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03844 ATGCAGGATCTTGTTCAAGTTAGAAACATTAGAAATGCAAATTATAACCTTGATGAACCAGTTTATTCATCTACAGAAATGCTCAACTTCTTAACTACTGCTACTTCAAATCCTTTGGAGTATCAAGAACTAGGTGCAGCTTCAGAACCAAGTAGGTTAATGATGCAACAATATCATCAGCAACATTATGTTTCATTACCTCATTCAGAACTGAGTGATTTTGGAAATTGGAGAAACAGTGTTCCTGCTCCACATCAACTCACTGATCAATATTGGTTATTAAACAATGCAAACAATTCTCTTTCTTATGTATATGGTGCTGAAAAGCAATTAGGTTTGATGCATCAGAATCAGAATAATTCTTTGCAGGATGTTGTCAAGTCTATCACTTCCAATAGGTCAGAGTCAAAAATGGCATCACTTTTGCATCTTAATGGTCAAGGAATTTGTGTAGGAAATGCTTCTGAAATTCAACTTCAACCAAAACCACAAAGCTTATCATTATCACTTTCATCTAATAATATTACACAAAACAAGTCTTATGTTTCACATTTTGAAGAGGGGACTTCTTCAACAGATGAATTTCAAAGTATGAAGCATATGAAGCCTTCCATCATTTCTAGAGATTGTGGAAAATCATCACATCAAGACTTGGTGGTTGGAATAATACCTAATTCAAAGAGTCCTTCTAGTACTAGTTATGGAAATCTGGGTCCACTTGGTCCTTTTACTGGTTATGCTACTATTCTTAAGAGTTCGAGATTCTTAAAAGTTGCACAAAATTTGTTAGATGGGTTTTGCTCTCCAAAATTGGTGACAACATGTGATGTTTCTTCATCATCAATGTTCCCTAGTGCTGATTGGGGGAACAGAAGTAGCTTAGGTGTTTCTTTGCGGCCAGATTATCAGCAGAATAAAGCAAAGCTTATGTTCATGCAAGAAGAGGTTAACAGGCGATACAAACAGTATCATCAACAAATGCAAATGGTTTTTTCATCCTTTGAATCAGTAGCAGGTCTTAATTCAGCTACTCCTTACATCGATTTGGCTTTGAAGACGGTATCAAAACACTTCAAGTGCCTAAACAATGCTATTTCAAATCAGCTCAACCATATAAGCGAAGTCCTGCGAAATGATTTGTCAATACCAACCACAACCAATAGTACTAAACTAGTTGACACTAATAATGTGGCAAGCCTAAGATGCATGGATCAAAGCCTACAAAAGAATAAACCTGAAAAGGTTCCATCAGGTTTTAATGATCCACAACAACAGCATGTTTGGAGGCCTCAGAGAGGCTTTCCGGAACGTGCAGTGGCGATTCTTAGAGCTTGGTTGTTTGAACATTTTCTTCATCCTTACCCTACAGACACTGATAAACACATGTTGGCTACTCAGACAGGTCTTTCGCGAAACCAGGTGTCAAATTGGTTTATTAATGCTCGAGTTCGCGTATGGAAGCCTATGGTTGAAGAAGTACACATGCTTGACAAAAAAACAGCAGGTGCCGGTGAGAATTCCAGTCCAAATGAGAGAACTTATGGCACTGAAGTGGGTTCATGCAGCCAACGAAGAATGGATAAGGCATTGAATAAGTTTGTTACGCATTCAATACCTGAAAATCAAATTCAATGTATGGAACTTGGTTCATCTATAGATACAAATGCAGAGGAAAATGAGTTAAATGAGGCAGAAGAATGGAGTAGAGAGAAGAGGTATAAATTGGAATGTGGAATGAGTTCAAGAATGGATGGAACACTTATGGATTTTTTGCCATATAGACATAGTGGACATGATGTTGTGAGATCACTTGGATTGGATCTGTTTCATTGA 1833 0.3742 MQDLVQVRNIRNANYNLDEPVYSSTEMLNFLTTATSNPLEYQELGAASEPSRLMMQQYHQQHYVSLPHSELSDFGNWRNSVPAPHQLTDQYWLLNNANNSLSYVYGAEKQLGLMHQNQNNSLQDVVKSITSNRSESKMASLLHLNGQGICVGNASEIQLQPKPQSLSLSLSSNNITQNKSYVSHFEEGTSSTDEFQSMKHMKPSIISRDCGKSSHQDLVVGIIPNSKSPSSTSYGNLGPLGPFTGYATILKSSRFLKVAQNLLDGFCSPKLVTTCDVSSSSMFPSADWGNRSSLGVSLRPDYQQNKAKLMFMQEEVNRRYKQYHQQMQMVFSSFESVAGLNSATPYIDLALKTVSKHFKCLNNAISNQLNHISEVLRNDLSIPTTTNSTKLVDTNNVASLRCMDQSLQKNKPEKVPSGFNDPQQQHVWRPQRGFPERAVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEVHMLDKKTAGAGENSSPNERTYGTEVGSCSQRRMDKALNKFVTHSIPENQIQCMELGSSIDTNAEENELNEAEEWSREKRYKLECGMSSRMDGTLMDFLPYRHSGHDVVRSLGLDLFH 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03844 610 FunFam BEL1-like homeodomain protein 9 431 493 - -
Mepo6g03844 610 Pfam Associated with HOX 249 366 IPR006563 -
Mepo6g03844 610 SUPERFAMILY Homeodomain-like 429 493 IPR009057 -
Mepo6g03844 610 SMART prehox3 244 367 IPR006563 -
Mepo6g03844 610 MobiDBLite consensus disorder prediction 503 520 - -
Mepo6g03844 610 MobiDBLite consensus disorder prediction 500 520 - -
Mepo6g03844 610 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 131 507 - -
Mepo6g03844 610 Pfam Homeobox KN domain 445 484 IPR008422 GO:0003677|GO:0006355
Mepo6g03844 610 ProSiteProfiles 'Homeobox' domain profile. 425 488 IPR001356 GO:0003677
Mepo6g03844 610 CDD homeodomain 428 489 IPR001356 GO:0003677
Mepo6g03844 610 SMART HOX_1 428 492 IPR001356 GO:0003677
Mepo6g03844 610 Gene3D - 431 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03844 Mepo-Chr6 50643551 50646483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03844 185 497 Homeobox Transcription Factor Family AT5G02030 48.378 2.70e-75 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo6g03844 POX 2.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03844 - - psat:127083522 738.799