Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03839 ATGTTACGGCCTGAAGAGGATCCATTAAAGTGGGATGAGGCGGCGGAGGCGTTGAAGGGGAGCCATTTTGAGGAAGTGAAGAGGATGGTGGAGGATTATAGGAAGGAGGTGGTGAGGGTGGGAGGAGAGACATTGAGGGTGGGGGAGGTAGTGGCGGTCGCAGAGAGGTTAGCGACCGTGGAGCTGAATGAGGGGGCAAGGGTTAGAGTTAAGGAGAGTAGTGAGTGGGTGATGGAGAGTGTCCATAAAGGTACTGACTTTTATGGTGTCACTACTGGCTTTGGTTCAACCTCCCATAGAAGAACTAACCAAGGTCATGCACTTCAAACTGAACTCATTAGGTTTTTGAATGCTGGAATTTTCGGTAATGGAACAGAACAATGCCATACACTACCACAAAATGCAACAAGAGCTGCAATGCTAGTAAGAATAAACACACTCCTTCAAGGCTACTCAGGAATTAGATATGAAATACTAGAAGCCATTGCAAAGCTTCTCAACCACAACATCACACCATGTTTACCTTTGCGCGGATCAATTTCCGCCTCAGGTGACTTGATTCCATTTTCTTACATAGCTGCACTCCTAACAGGTAGGCCTAATTCAAAAGCTATTAATGGATCCAATGGCGAAACCCTAAATGCTTCACAAGCTTTTAATTTAGCTGATATAGGTGAAGAATTCTTCAAGTTGCACCCTAAAGAAGGTCTTGCACTTGTTAATGGAACTGGTGTTGGTGCTGGTTTAGCTTCTATAGTTCTATTTGATGCTAATATCTTAACTGTTTTATCTGAAATTATGTCGGCGGTTTTCGCTGAAGTTATGCAAGGAAAGCCAGAGTTTACAGATCATTTGACACATAAATTGAAACATCATCCTGGTCAAATTGAAGCTGCAGCATTGATGGAACATATTTTGCATAAAAGTGCTTGTGTTCATGCTGCAACGAAATCGCATGAGATAGATTTTCATAGAAAGCCTAAACAAGATAGATATGCGCTTAGGACTTCACCGCAATGGTTAGGTCCACAAATTGAAGTTATTAGGTATTCAACAAAATCAATTGAGAGAGAGATTAATTCTGTGAATGATAATCCTTTGATTGATGTGAAAAGGAACAAAGCTTTGCATGGTGGAAACTTTCAAGGTACACCAATTGGTGTTTCTATGGACAATACAAGATTAGCTTTGGCTGCAATTGGAAAATTAATTTTTGCTCAAATGTCTGAGTTGGTTAATGATTTTTACAACAATGGTTTGCCTTCAAATCTCTCTGGTGGTAAATGTTTAAGCTTGGATTATGGACTTAAAGGCGGTGAGATAGCAATGGCAGCATATTGTTCTGAGCTTCAGTTTTTAGCTAATCCTGTTACTAATCATGTCCAAAGTGCTGAACAGCATAATCAAGATGTTAATTCACTTGGATTAATCTCTGCAAGGAAAACAGAAGAAGCTGTTGAGATATTAAAGCTTATGTGTTCAACTTACTTGATTGCTTTATGTCAAGCAATAGATTTGAGGTATTTGGAGGAGAATCTAAAGAGCACAGTTAAGAAAACAGTGAGTCAAGTGGCTAGAAAAATCTTAAATGTTGGAGTCAATGGTGAGATTCATCATTACATATCTTGTGAGAAAGATTTGCTTAAAGTGGTTGATTGTGAGTATGTTTTTACATATATTGATGACCCTTGTAATGACACATATCCACTTATGCAAAAACTAAGGCAAGTGCTTGTGGAACATGCATTGAGGAGTAATGATAGTAATGGTTTGAAAAATATAAATGCTTCTATGTTCCTTAAGATAGGTGCATTTGAGGAGGAACTAAAAAGGGTCTTGCCAAAAGATGTTGAATTTACAAGACGTGCTTTTGAAAAAGGGATTTTAGCAAGTCCTAACAAAATCAAGGAAGGCAGGTCTTATCCATTGTATAAGTTTGTTAGAGAGGAATTGGGGACTGAATTTTTAACTGGTGAAAAAGTTAAATCACCAGGAGAAGATTTTGATAAAGTTTTTAATGCAATTACTCTTGGAAAGATAATTGATCCAATGTTTGAATGCCTTAAGGATTGGGATGGTACTCCCCTTCCTATAGAATTTCATTAG 2106 0.3851 MLRPEEDPLKWDEAAEALKGSHFEEVKRMVEDYRKEVVRVGGETLRVGEVVAVAERLATVELNEGARVRVKESSEWVMESVHKGTDFYGVTTGFGSTSHRRTNQGHALQTELIRFLNAGIFGNGTEQCHTLPQNATRAAMLVRINTLLQGYSGIRYEILEAIAKLLNHNITPCLPLRGSISASGDLIPFSYIAALLTGRPNSKAINGSNGETLNASQAFNLADIGEEFFKLHPKEGLALVNGTGVGAGLASIVLFDANILTVLSEIMSAVFAEVMQGKPEFTDHLTHKLKHHPGQIEAAALMEHILHKSACVHAATKSHEIDFHRKPKQDRYALRTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVKRNKALHGGNFQGTPIGVSMDNTRLALAAIGKLIFAQMSELVNDFYNNGLPSNLSGGKCLSLDYGLKGGEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTEEAVEILKLMCSTYLIALCQAIDLRYLEENLKSTVKKTVSQVARKILNVGVNGEIHHYISCEKDLLKVVDCEYVFTYIDDPCNDTYPLMQKLRQVLVEHALRSNDSNGLKNINASMFLKIGAFEEELKRVLPKDVEFTRRAFEKGILASPNKIKEGRSYPLYKFVREELGTEFLTGEKVKSPGEDFDKVFNAITLGKIIDPMFECLKDWDGTPLPIEFH 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03839 701 SUPERFAMILY L-aspartase-like 6 698 IPR008948 GO:0003824
Mepo6g03839 701 Gene3D Fumarase/aspartase (Central domain) 245 693 - -
Mepo6g03839 701 Gene3D - 510 633 IPR023144 -
Mepo6g03839 701 NCBIfam phenylalanine ammonia-lyase 7 689 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mepo6g03839 701 CDD PAL-HAL 43 507 IPR001106 -
Mepo6g03839 701 PANTHER HISTIDINE AMMONIA-LYASE 7 698 IPR001106 -
Mepo6g03839 701 Gene3D - 2 243 IPR024083 -
Mepo6g03839 701 Pfam Aromatic amino acid lyase 45 521 IPR001106 -
Mepo6g03839 701 FunFam Phenylalanine ammonia-lyase 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03839 Mepo-Chr6 50595877 50598975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03839 1 698 Monolignol Biosynthesis Gene Families AT2G37040 72.857 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03839 K10775 - vvi:100241575 1070.07