Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03837 ATGAAGCATCAACTCAAAGTTTCTGTTGCTCTTGTTATTAGCTTGCTATGGTTTCAGCACTCATTTTGTGCAAAGGAACCGTCTGATAGTGGTCGAAACAAGTGGAAATGTAAATGTTCTTTTCGAGCGAATCAGAGATACTCTATTTCTAATTGTTCCAAGTCATGTGATTGCCATTCAGAGAGTTCATCCATATGGACATGTATATGTGATTCAAATGGCTTTCCTAAAGTGGCATCAGGAAGCCATAATCCTAACTGCTTTATTGCCTGCAACTGCGTCTGGGGAACTGCTAAGATGACACTAGGTTCAAAGTCACACATTTCGAGCAAGATTGTAATAATCATTCTAATAATGTGTGTTACATGCACAATCGTTGCATTTCTCGCCTTTGTTGTATGTTATGTTCGCCGAAGGGAAAGACATCATCCTATTCAATCACCAATGGTCTCGTCATCAGATAAGGAAACAAGTTATAGTAGTACCAGCAACTTCATTAGTCAAAGGACTTCTTTTGTTCCGGAAACAAAAAGCGTTATAAATTCTCCCATTAGTCATATTACTAGATGCCTTCAAAAAGCCTCTATCTTGTTTGGGAATCAAAGAGAAACGTTTCATGGAAATATTATTCAATTTTCATTTGCTGAACTGGAAAATGCCACTGAAAACTTTTCAGCTTCAAACCTCATTGGACTAGGTGGAAGTAGTTATGTATACCGTGGTCAACTGAAAAATGGTAGTAATGTGGCAGTCAAGCGACTTAAAGATCAAGGAGGGCCCAAAGCAGACACTGAATTTTTCACAGAGATTGAATTATTGTCTAGACTTCACCATTGTCATCTGGTGCCATTGATTGGATACTGCTCAGAATTAAAAGGAAAAAATGTTCAGAGGTTACTTGTGTTTGACTACATGAGTAACGGAAATTTGAGGGACCGTTTAGATGGAGTTTTTGGAAAAAATATGGATTGGTCTACTCGTGTTACAATTGCATTAGGAGCTGCAAGGGGCTTGGAGTATCTTCATGAAGCAGCTGCGCCAAGAATTCTCCATAGAGATGTCAAATCAACAAACATTCTTCTTGATAAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAGACTTGAGATCTGATAGCCTCCCAAGTTGTTCATATTCTTCACAAAGAATGAAGGGGACATTTGGCTATTTTGCACCTGAGTATGCAATTGTTGGGAGATCCTCTATTGAGTCAGATGTCTTCAGTTTCGGCGTGGTTCTTCTTGAGCTTATTAGTGGTCGCCAACCAATCCTTAAATCTGCAGGCAAAGAAGAAAGCCTTGTTGTATGGGCTGCTCCTCGCTTACAGGATAGTAGGCGAGTATTGATCGAGTTGGCTGATCCACAATTGAAAGGAAACTTCCCAGAAGATGAGGTGCATATAATGGCAAACCTAGCAAAGGAGTGCTTACTGTTGGATCCGGATAATAGACCAACTATGAGTGAAGTTGTTTTAATTCTTTCAAGTATTTCTCGAACCAAATCTAGAAGGAGAAGATACATTCAATTGTGCCTTTTTCAGGACCGAGATGATGATGCAGAACAGCAAAGACAATCTTCATTGAGTAGATTTCCACCTCATAATTCATTGCCGCGTTGTACTGACTACGATCTTCGTGTTGGAAACGAAGATAGAGATGTAGATACAATTTCAACCGAGTATATGAAAAGTTTGATCCTCTTGACTTCAAAAGGTGAGAAGTGGCATCCATCAGAAGAGGAAATGGTAGACCTATCCGAGCCTCGGTTGGAATCATTTTGCATGGAAAACATCAGTTTCCCTTGA 1833 0.3944 MKHQLKVSVALVISLLWFQHSFCAKEPSDSGRNKWKCKCSFRANQRYSISNCSKSCDCHSESSSIWTCICDSNGFPKVASGSHNPNCFIACNCVWGTAKMTLGSKSHISSKIVIIILIMCVTCTIVAFLAFVVCYVRRRERHHPIQSPMVSSSDKETSYSSTSNFISQRTSFVPETKSVINSPISHITRCLQKASILFGNQRETFHGNIIQFSFAELENATENFSASNLIGLGGSSYVYRGQLKNGSNVAVKRLKDQGGPKADTEFFTEIELLSRLHHCHLVPLIGYCSELKGKNVQRLLVFDYMSNGNLRDRLDGVFGKNMDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGMAKDLRSDSLPSCSYSSQRMKGTFGYFAPEYAIVGRSSIESDVFSFGVVLLELISGRQPILKSAGKEESLVVWAAPRLQDSRRVLIELADPQLKGNFPEDEVHIMANLAKECLLLDPDNRPTMSEVVLILSSISRTKSRRRRYIQLCLFQDRDDDAEQQRQSSLSRFPPHNSLPRCTDYDLRVGNEDRDVDTISTEYMKSLILLTSKGEKWHPSEEEMVDLSEPRLESFCMENISFP 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03837 610 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Mepo6g03837 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Mepo6g03837 610 Gene3D Phosphorylase Kinase; domain 1 197 304 - -
Mepo6g03837 610 FunFam receptor-like serine/threonine-protein kinase NCRK 305 515 - -
Mepo6g03837 610 SUPERFAMILY Protein kinase-like (PK-like) 205 503 IPR011009 -
Mepo6g03837 610 ProSiteProfiles Protein kinase domain profile. 224 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03837 610 SMART serkin_6 224 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03837 610 PANTHER OS01G0750732 PROTEIN 31 526 - -
Mepo6g03837 610 FunFam receptor-like serine/threonine-protein kinase NCRK 198 304 - -
Mepo6g03837 610 CDD STKc_IRAK 230 506 - -
Mepo6g03837 610 Pfam Protein tyrosine and serine/threonine kinase 228 501 IPR001245 GO:0004672|GO:0006468
Mepo6g03837 610 Gene3D Transferase(Phosphotransferase) domain 1 305 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03837 Mepo-Chr6 50561272 50565282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03837 1 607 Receptor kinase-like Gene Family AT2G28250 49.592 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Mepo6g03837 PK_Tyr_Ser-Thr 6.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03837 - - gmx:100499641 871.307