Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03836 ATGGGATTTGATAATCCAAGATCTGAAAGGTTTGAAGATGATCCTGAAATATCAAAAATTCCCACAACAAGTGGTGTTAAGGTGAAATACCACATTGATGGAACACAAATACCAGAACCAAGTTCCAAAAAGTCTCAAAAGAATGCTACAAGAAACAAGTTTTTGAAAACAAGAGTATTGTCAAGAGTATTCTCAGAAGACTATGAAAGAGTCAAAAAAAGAGTATTAGTATTAGATCCTAGGGGACAAATCATACATCGTTGGAACAAGATATTTTTAGTAGCATGTTTAGTTTCTTTGTTTGTGGATCCACTGTTCTTTTATTTGCCAGTGGTTAGAGATGAAGTTTGCATTGATATTGGAAAAACTCTTGAAGTTATTCTCACAGTTGTTAGATCATTTGGAGATTTGTTTTACATAGTTCAGATTTGTATGAAGTTTCGTACTGCTTATGTTGCTCCTTCTTCCAAGGTTTTTGGTAGAGGAGAACTTGTTCTTACCTATTCTAAGATTGCTCTTAGGTACTTCAGCAAGGGTTTTTGGTTAGACTTTATTGCTGCATTACCTCTTCCTCAGGTGTTGATTTGGATTATTATACCAACACTAAGGGGTTCAACAATGGCAAATACCAAAAATGTCCTTCGTTTTTTCATCATTTTTCAATATATTCCAAGGCTGTATTTGATTTTTCCACTTTCATCACAAATTGTAAAAGCTACAGGGGTTGTGACAGAAACAGCTTGGGCAGGTGCTGCTTACAACCTCATGCTTTACATGTTGGCTAGCCATATTTTAGGAGCTTGCTGGTACCTTCTTTCAATTGAGCGTCAAGAAGCATGTTGGAAAAGTGTGTGCAATATGGAGAAATCAAATTGTCAATATGGATTCTTCAATTGTCACAGTGTTAAAGATGCTCCAAGAGTAGCTTGGTTTATAGCTAGTAATGTCACAAATTTATGTTCACCAAATGCCGGCTTTTATCCGTTTGGTATATATGCTGATGCCATGACTTCCAAAGTTACATCATCACCATTCTTCAATAAGTACTTCTATTGTCTCTGGTGGGGATTAAGGAACCTGAGTTCTTTAGGACAAGGTCTTCTTACTAGCACTTTTATCGGAGAAATAATGGTTGCTATTGTGGTTGCAACTCTTGGATTGGTTCTTTTTGCATTGCTGATTGGTAATATGCAGACATACCTTCAGTCAATAACTGTTCGCCTAGAAGAGTGGAGGGTGAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAACTCCCTCCAGAACTAAGAGAGTCTATTCGTAAATATAATCAATATAAATGGGTGGCTACACGAGGAGTAGAAGAAGAAGATCTTCTCAAAGGACTTCCACTGGATCTTAGGAGAGAAATCAAGCGGCACCTTTGTCTTGAACTAGTTCGAGGAGTCCCGTTGTTTGATCAAATGGATGAGAGGATGCTAGACGCAATATGCGAAAGACTAAAGCCTGCATTATGCACCGAAGGCACTTACCTTGTTCGCGAAGGCGATCCAGTGAATGAGATGCTCTTCATAATTAGAGGCCATCTTGATTCTTACACAACAAATGGAGGCCGTGACGGATTCTTCAACTCATGTAGAATCGGTCCAGGCGATTTCTGTGGTGAAGAGCTCTTAACATGGGCCTTAGATCCAAGACCAAGTGTGATACTCCCTTCATCAACAAGAACAGTTAAAGCTTTCTCAGAAGTAGAAGCCTTTGCACTTATAGCTGAAGATCTTAAGTTTGTTGCATCTCAATTTAGAAGACTACATAGTAAACAACTTAGGCATAAATTCAGATTTTATTCACACCAATGGAGAACTTGGGCTGCTTGTTTTATTCAAGCTGCATGGAGAAGGCACAAGAAAAGGAAAGAAGCTGCTGAATTAAGGGCTAAGGAGAATCTTGTGGCAGCTTCAGAGGCTGAAAATGAAATAGCAAAAAAATATGGGAAAGGTTTTGTTGTTTATGGAACAAGGGTTGCAAGGAGTACTAGGAAAGGTGTTAATATGCATTCTGGGACAAATTCTGGAGTAGTTAGCTCTTTGCAGAAACCAACAGAACCTGATTTTTCTGATGAATAA 2112 0.3835 MGFDNPRSERFEDDPEISKIPTTSGVKVKYHIDGTQIPEPSSKKSQKNATRNKFLKTRVLSRVFSEDYERVKKRVLVLDPRGQIIHRWNKIFLVACLVSLFVDPLFFYLPVVRDEVCIDIGKTLEVILTVVRSFGDLFYIVQICMKFRTAYVAPSSKVFGRGELVLTYSKIALRYFSKGFWLDFIAALPLPQVLIWIIIPTLRGSTMANTKNVLRFFIIFQYIPRLYLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWKSVCNMEKSNCQYGFFNCHSVKDAPRVAWFIASNVTNLCSPNAGFYPFGIYADAMTSKVTSSPFFNKYFYCLWWGLRNLSSLGQGLLTSTFIGEIMVAIVVATLGLVLFALLIGNMQTYLQSITVRLEEWRVKRTDTEQWMHHRQLPPELRESIRKYNQYKWVATRGVEEEDLLKGLPLDLRREIKRHLCLELVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRDGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAFSEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKEAAELRAKENLVAASEAENEIAKKYGKGFVVYGTRVARSTRKGVNMHSGTNSGVVSSLQKPTEPDFSDE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03836 703 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 47 700 - -
Mepo6g03836 703 CDD CAP_ED 480 611 IPR000595 -
Mepo6g03836 703 SMART cnmp_10 480 611 IPR000595 -
Mepo6g03836 703 MobiDBLite consensus disorder prediction 1 20 - -
Mepo6g03836 703 MobiDBLite consensus disorder prediction 1 17 - -
Mepo6g03836 703 MobiDBLite consensus disorder prediction 676 696 - -
Mepo6g03836 703 Pfam Ion transport protein 88 407 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mepo6g03836 703 ProSiteProfiles cAMP/cGMP binding motif profile. 480 565 IPR000595 -
Mepo6g03836 703 FunFam Cyclic nucleotide-gated ion channel 1 407 471 - -
Mepo6g03836 703 Coils Coil 634 654 - -
Mepo6g03836 703 MobiDBLite consensus disorder prediction 676 703 - -
Mepo6g03836 703 SUPERFAMILY Voltage-gated potassium channels 79 402 - -
Mepo6g03836 703 Gene3D - 91 406 - -
Mepo6g03836 703 Gene3D Helix hairpin bin 408 471 - -
Mepo6g03836 703 PRINTS EAG/ELK/ERG potassium channel family signature 143 152 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo6g03836 703 PRINTS EAG/ELK/ERG potassium channel family signature 443 450 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo6g03836 703 PRINTS EAG/ELK/ERG potassium channel family signature 260 270 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo6g03836 703 PRINTS EAG/ELK/ERG potassium channel family signature 349 366 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo6g03836 703 PRINTS EAG/ELK/ERG potassium channel family signature 393 402 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo6g03836 703 FunFam Cyclic nucleotide-gated ion channel 1 478 596 - -
Mepo6g03836 703 ProSiteProfiles IQ motif profile. 616 644 IPR000048 GO:0005515
Mepo6g03836 703 SUPERFAMILY cAMP-binding domain-like 410 606 IPR018490 -
Mepo6g03836 703 Gene3D Jelly Rolls 478 598 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03836 Mepo-Chr6 50534551 50538049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03836 50 703 Ion Channels AT2G28260 74.006 0.0 1006
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03836 K05391 - gmx:100786868 1145.95