Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03816 ATGAACCATGCAAGAAAGCAATTAGGACAGAGTAGTACAGCTAAGGATTTGTTCACTTTCAAAGGTTTACTTGAAGCTGGTCCACAACAAGTTGGATGCAATATTATAAAACATCCATGTCAAATGCAATGGCCTTGTCTTGACTGCTCTAAACAAAATGAACCAGGTGAGGTAAAAGAAAATATAGACAAGAACAATGACACTCCAATACTTGCAAAAGAAGCTCAAGTTAAAAAACCAGGAGGAAGAAGGGTTGCGGTCATAGCTGGTGGTGCTGGTGCTGCCTTAATCATCATTGTCATTGCGGTGATTATATGTATCTGCTTGAGAAGATGTAAAAGATTTAAAAAGCAACCATCTGATTCTGCTTCTTCTGTGCCATCTCAAGCTGTTGAGATGGGAAGAATCAACAACTCGCAGTATGTTAATGCTTTCTCTCCACATTATATGCAGAACACAAGGCTGTTAACAATTTTAGAGATAGAACAAGCTACAGGAAAATTTAATCAAAGTAACATTATAGGTGAAGGGAGATTTGGTTTTGTATACAAAGGTTTGCTTCAAGATGGATCTTTTGTCGCTATAAAAAGGCGACTATTTTCTCTAACTCGAGATTTCATACCTGAGGTCAAGCAGATAGCTCAAATCCACCACATTAATCTTGTGAAGCTTATAGGTTATTATGATGATAGCTATCAACAATTACTTGTGTATGAATATCTTCCAAATGGCAATGTAGGGAATCATCTATATGATAGTGAAGGTTTTCCTATTGGAAAGTTAAACTTGCAGCGTAGGGTATCCATCGCCTTAGGCGCGTCCAAAGGACTTGAACATCTTCACAATCTGGTCCCTCCTTTGCTTCACACAAATTTTAGTACAAGAAATGTTCTGTTAGATGAAAATTATACAGCCAAAGTTTCTGATTATGGATTCTTCAAATTGCAAACAGAAATTGATCAGGCAGGCTCATCTTCAAATGTTGACTACTTTCATGACCCAGAGATGAGCTTATCACAAAACTACTCGGAGCAAAGTGATGTATACAGTTTTGGAGTGTTTTTACTAGAGTTGATTAGTGGCTGTGAAGCATATAACAGAAACATGTCAAATCCATATGAAAGTCTTGTATTTGAGGCAAAATATAGCAGTGATTTGGAAAAATTTATTGACAAAGCATTAGGAGAGCAAGAAAAACATGGTGCTAGAAGAATAATGAAGTTGGCATTGCTATGTGTGGATGTGATTCTTAGAAGACCATCAATGGCACATATTGTGCAAGAATTGGAGAGGATACAAAGAGATATTGCTCCTTTGTATTCTGAAAACAATGAGGGGATTGGTGTGGTGAAACTTGGGAGTGAGCTATTCAAACAAGCCTCTTGA 1386 0.373 MNHARKQLGQSSTAKDLFTFKGLLEAGPQQVGCNIIKHPCQMQWPCLDCSKQNEPGEVKENIDKNNDTPILAKEAQVKKPGGRRVAVIAGGAGAALIIIVIAVIICICLRRCKRFKKQPSDSASSVPSQAVEMGRINNSQYVNAFSPHYMQNTRLLTILEIEQATGKFNQSNIIGEGRFGFVYKGLLQDGSFVAIKRRLFSLTRDFIPEVKQIAQIHHINLVKLIGYYDDSYQQLLVYEYLPNGNVGNHLYDSEGFPIGKLNLQRRVSIALGASKGLEHLHNLVPPLLHTNFSTRNVLLDENYTAKVSDYGFFKLQTEIDQAGSSSNVDYFHDPEMSLSQNYSEQSDVYSFGVFLLELISGCEAYNRNMSNPYESLVFEAKYSSDLEKFIDKALGEQEKHGARRIMKLALLCVDVILRRPSMAHIVQELERIQRDIAPLYSENNEGIGVVKLGSELFKQAS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03816 461 SUPERFAMILY Protein kinase-like (PK-like) 147 439 IPR011009 -
Mepo6g03816 461 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 95 432 IPR047117 -
Mepo6g03816 461 ProSitePatterns Protein kinases ATP-binding region signature. 174 196 IPR017441 GO:0005524
Mepo6g03816 461 Gene3D Phosphorylase Kinase; domain 1 128 240 - -
Mepo6g03816 461 ProSiteProfiles Protein kinase domain profile. 168 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03816 461 Gene3D Transferase(Phosphotransferase) domain 1 241 447 - -
Mepo6g03816 461 Pfam Protein tyrosine and serine/threonine kinase 171 428 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03816 Mepo-Chr6 50278422 50283246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03816 77 434 Receptor kinase-like Gene Family AT4G02010 33.594 1.53e-51 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Mepo6g03816 PK_Tyr_Ser-Thr 2.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03816 - - gmx:100780443 615.92