Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo6g03811 | ATGACACTTTTCCATAATCTCTCTAGAAATATAAGTATATTATCGACGGTGGGGACTACATCCAAAGCAACTATTTGTGTAGATGGTAAAAGAGAGACTTACGAGGGAAGATTTGAGATCATATCGCTTAGTGGATCTTTAATTCATAAAAAAGAAAGCCATTGCAAGGTATTTGGGGGCTTAAATGTGAGCTTGTCATCAAATGGTTGGGTATTTGGTGGTCAATTTATTGACATTTTGATGGCTGCTTCCCCTGTTCAGATAGTATTGGGGAGTTACCCTGCAGGGAATCAAGAGGAAGTCGAGTTTGACCCAAAAGAGCCTTCTAAAGAAGACCCAAGTCCATCATCACAAACTACTCATGGCTAA | 369 | 0.3957 | MTLFHNLSRNISILSTVGTTSKATICVDGKRETYEGRFEIISLSGSLIHKKESHCKVFGGLNVSLSSNGWVFGGQFIDILMAASPVQIVLGSYPAGNQEEVEFDPKEPSKEDPSPSSQTTHG | 122 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo6g03811 | 122 | ProSiteProfiles | PPC domain profile profile. | 1 | 115 | IPR005175 | - | |
| Mepo6g03811 | 122 | Gene3D | - | 4 | 109 | - | - | |
| Mepo6g03811 | 122 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 8 | 93 | IPR005175 | - | |
| Mepo6g03811 | 122 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 9 | 96 | - | - | |
| Mepo6g03811 | 122 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 1 | 115 | IPR039605 | GO:0003680 | |
| Mepo6g03811 | 122 | MobiDBLite | consensus disorder prediction | 99 | 122 | - | - | |
| Mepo6g03811 | 122 | CDD | DUF296 | 1 | 93 | IPR005175 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo6g03811 | Mepo-Chr6 | 50242258 | 50242931 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo6g03811 | 1 | 99 | AT-hook Motif Nuclear Localized (AHL) Family | AT2G33620 | 47.619 | 2.17e-18 | 77.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo6g03811 | - | - | mtr:120577018 | 153.68 |