Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03810 ATGACATTTCTCCAAAATCTCTTTGGAAATATATTATCGGCAGTGGGGACCACATCCAAAGAACCTATTTGTGTAGATGGTAAAACAAAGACTTACGAGGGAAGATTTGAGATCATATCGCTAGTTGGATCTTTAATTCATAAAGAAGAAAGTCATTGCAAGGTATTTGGGGGCTTAAATGTGAGCTTGTCATCAAATGGTGGGGTATTTGGTGGTCAACTTATTGACATTTTGATGGCTGCTTCCCCTATAGTATTGGGGATTTACCCTGCAGGGAATCAAGAGGAAGTGGTGTCTGACTCAAAAGAGCCTCCTAAAGAAGATAAAAGTCCACCATCAGCTAAGAGTCAAGGGAAAGTCGAGTATAGCCCAAAAGAGCCTTCTAAAGAAGACCCAAGTCCACCATCAACTGAGAATCAAGAGAAAGCCGAGTTTGACCCAAAAGAGTCTTCTAAAGAGGACCCAAGTGCGATGTCAGACCTCCAAGAGAAACTTAAGAAAATTAAGCAGAGCAAAAAGACTGAAACTAAACTCACTAGCTCAAAGAAGAGGGACCTCACTAGTGTTTGTCATCTTTTGGATGGAGCTACTGCCTTCTCGTCTAAGGGGAGATCACCTACTGTCTCTGGCGAGCAGTCTAGTTCATCTCCTCAGAGGGTCATCGATCTTGATGATCCACCGGCTCAACCTCCACCCAAGTGCTTAAAGACATAA 714 0.4286 MTFLQNLFGNILSAVGTTSKEPICVDGKTKTYEGRFEIISLVGSLIHKEESHCKVFGGLNVSLSSNGGVFGGQLIDILMAASPIVLGIYPAGNQEEVVSDSKEPPKEDKSPPSAKSQGKVEYSPKEPSKEDPSPPSTENQEKAEFDPKESSKEDPSAMSDLQEKLKKIKQSKKTETKLTSSKKRDLTSVCHLLDGATAFSSKGRSPTVSGEQSSSSPQRVIDLDDPPAQPPPKCLKT 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03810 237 MobiDBLite consensus disorder prediction 122 189 - -
Mepo6g03810 237 MobiDBLite consensus disorder prediction 200 220 - -
Mepo6g03810 237 MobiDBLite consensus disorder prediction 96 237 - -
Mepo6g03810 237 MobiDBLite consensus disorder prediction 99 114 - -
Mepo6g03810 237 Coils Coil 158 178 - -
Mepo6g03810 237 Pfam Plants and Prokaryotes Conserved (PCC) domain 10 86 IPR005175 -
Mepo6g03810 237 CDD DUF296 11 75 IPR005175 -
Mepo6g03810 237 ProSiteProfiles PPC domain profile profile. 1 111 IPR005175 -
Mepo6g03810 237 Gene3D - 5 101 - -
Mepo6g03810 237 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 11 149 IPR039605 GO:0003680
Mepo6g03810 237 SUPERFAMILY AF0104/ALDC/Ptd012-like 8 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03810 Mepo-Chr6 50238475 50242043 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03810 11 96 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 43.011 7.66e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03810 - - mtr:120577018 179.874