Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03807 ATGGCAGATTATAGGAGTTTTTCATTTACGAAAATGATTGGCTGCTGGAGTTGCTTTGGGTTGATAAAAAAACAACCGAGACGTGGACGGACTAAACGCGGCATCAAAAATTTTCTCTCCCAAGGGCTTTTGACGGATGGAGAAACTGAGTATGATGAGGTGTCCTATAGTGGTGATTATACTAGTAATACAACCAGCGGAGATGACAGTGAGCCGCAAAATTTACCCAATCGTTCCGAGGAAATTTTGAACTTCAGAGCGGAGAATGGCATGATTTGTAGGCCTTTTCCTGTTAAAGAGACTGTCAAGCTTGTTCGATCAGAGGATGAAAATGGGAACAAGATGTTAAATGAGTATATTCGAGAGTATAAGATTGGTTCCGGTAGCTATGGCAAAGTGGCTCTTTATCAAAGTAGCGTTGATGGACAACATTATGCTATTAAGTCTTTTCATAAGTCTCACTTACGGAAGCTTCGAGTTGCTCCATCCGAGACTGCCATGACTGATGTACTACGCGAGGTACTTATCATGAAAATGCTAGAACATCCTAATATAGTCAATCTCATCGAGGTGATTGATGACCCAGAGTCGGATGACTTCTACATGGTACTTGAATATGTGGAAGGCAAATGGGTTTGTGAGGGTTCTGGTCGACAATGTGCCATAGGTGAAGAAACTGCTAAGAAATACATGCGCGATATAGTCTCGGGATTAACATATCTTCATGCTCATAATATTGTGCATGGGGATATAAAACCTGATAATCTGTTGATTACTCGCAATGGGACTGTAAAGATAGGGGATTTCAGTGTTAGCCAGGCTTTTGAGAATGGTAACGATGAACTTCGTCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTAGGTCTTACTTATCATGGTAAATTGTCAGACACGTGGGCAGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATACCCATTTCTTGGAGACACGCTTCAAGATACATATGACAGAATAGTCAATAATCCTATAGAAATCCCGGATGACATAAACCCGCAGTTAAAGAACTTAATAGAAGGATTGCTTTGCAAAGATCCAGAACAAAGAATGACATTAGCTGAAGTTGCCGAGCATGTCTGGGTTATTGGAAATGATGGGCCACTTGGTGAGTACTCGTGTTGGTGCAAACGCAAGAGTATGGTGAGTGAAGACTTCTAG 1215 0.414 MADYRSFSFTKMIGCWSCFGLIKKQPRRGRTKRGIKNFLSQGLLTDGETEYDEVSYSGDYTSNTTSGDDSEPQNLPNRSEEILNFRAENGMICRPFPVKETVKLVRSEDENGNKMLNEYIREYKIGSGSYGKVALYQSSVDGQHYAIKSFHKSHLRKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDDFYMVLEYVEGKWVCEGSGRQCAIGEETAKKYMRDIVSGLTYLHAHNIVHGDIKPDNLLITRNGTVKIGDFSVSQAFENGNDELRRSPGTPVFTAPECCLGLTYHGKLSDTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNNPIEIPDDINPQLKNLIEGLLCKDPEQRMTLAEVAEHVWVIGNDGPLGEYSCWCKRKSMVSEDF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03807 404 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 70 383 - -
Mepo6g03807 404 SUPERFAMILY Protein kinase-like (PK-like) 115 388 IPR011009 -
Mepo6g03807 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Mepo6g03807 404 Gene3D Phosphorylase Kinase; domain 1 113 216 - -
Mepo6g03807 404 SMART serkin_6 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03807 404 MobiDBLite consensus disorder prediction 55 76 - -
Mepo6g03807 404 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Mepo6g03807 404 MobiDBLite consensus disorder prediction 54 76 - -
Mepo6g03807 404 FunFam Serine/threonine-protein kinase Ssp1 113 215 - -
Mepo6g03807 404 FunFam Serine/threonine-protein kinase GRIK2 109 403 - -
Mepo6g03807 404 CDD STKc_LKB1_CaMKK 125 380 - -
Mepo6g03807 404 Pfam Protein kinase domain 121 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03807 404 ProSiteProfiles Protein kinase domain profile. 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03807 404 Gene3D Transferase(Phosphotransferase) domain 1 217 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03807 Mepo-Chr6 50206100 50211733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03807 125 391 CBL-interacting serine-threonine protein kinases AT2G25090 31.159 4.26e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Mepo6g03807 Pkinase 5.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03807 K00908 - gmx:100776013 707.212