Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03798 ATGGAGGGACAACAAAAAGGATCAAAATCAAATTACACTTTTCCACCTGGTTTCAGATTCCATCCTTCTGATGAAGAACTCATAGTTCATTACTTGCAAAACAAAATCAAATCGTGTCCGCTTCCAGCGTCGATTATAGCTGAGATTGATCTCTATAAGTATAATCCATGGGAATTACCTAAGAAGTCTTTGTTTGGTGAGGAAGAATGGTATTTCTTTAGTCCGAGAGACCGAAAGTATCCGAATGGTTTAAGGCCAAATAGAACAGCAGCTTCAGGATATTGGAAGGCAACTGGAACTGATAAGCCAATAATTTCTTCATGTGGATCAAAGCATATAGGAGTGAAGAAAGCTCTTGTATTTTATTCAGGTAGACCTCCTAAGGGAGTTAAGACAGATTGGATCATGAATGAGTATAGATTGGTGGACACAACCACAAAATCATTCAAACTTAAAGGTTCCATGCGGTTGGATGACTGGGTATTATGTCGGGTTCGAAATAAAGGCTATTCATTGAAGAATTTATCTGAAAATCAAGAGAATCCTAGTGAACCAAACATACCATTAAACCTACCAAGGGGTGAAGAACGCCCTACAAACGTGAACTTTCGATCTGACATTATCACAGATTATCAGTTCAAAGATTATCAGATCATAGCCTCTATTCTAGTTGGTGGAGTTATACCTCCAACTGAGAACATGTCGAGTTTGAGCGTTAATGGAAGCAAATGCAACAATCTAACTTCAGTTTATGAAGAAGGTTTCAATAAAGTGAATTCTCAAACTAAAATCTCTTCTTTGGAATGTTACTTCAATCCACTAAAAAGAAAATCTAATGAGGATGATGATCAGTTTGAAAATCTCATTTCTTTTAACAGCAAGTTCAACACTGAGAACAAATTAGACAAATCTCCTAGCATCGATTTTCAAAAGCTAAACGAATTTACCTTTACATAA 957 0.3636 MEGQQKGSKSNYTFPPGFRFHPSDEELIVHYLQNKIKSCPLPASIIAEIDLYKYNPWELPKKSLFGEEEWYFFSPRDRKYPNGLRPNRTAASGYWKATGTDKPIISSCGSKHIGVKKALVFYSGRPPKGVKTDWIMNEYRLVDTTTKSFKLKGSMRLDDWVLCRVRNKGYSLKNLSENQENPSEPNIPLNLPRGEERPTNVNFRSDIITDYQFKDYQIIASILVGGVIPPTENMSSLSVNGSKCNNLTSVYEEGFNKVNSQTKISSLECYFNPLKRKSNEDDDQFENLISFNSKFNTENKLDKSPSIDFQKLNEFTFT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03798 318 SUPERFAMILY NAC domain 11 168 IPR036093 GO:0003677|GO:0006355
Mepo6g03798 318 Gene3D NAC domain 23 171 IPR036093 GO:0003677|GO:0006355
Mepo6g03798 318 PANTHER NAC TRANSCRIPTION FACTOR 56 14 231 - -
Mepo6g03798 318 MobiDBLite consensus disorder prediction 175 195 - -
Mepo6g03798 318 FunFam NAC domain-containing protein 72-like 23 173 - -
Mepo6g03798 318 ProSiteProfiles NAC domain profile. 14 168 IPR003441 GO:0003677|GO:0006355
Mepo6g03798 318 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03798 Mepo-Chr6 50133832 50135425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03798 10 179 NAC Transcription Factor Family AT1G69490 67.059 9.56e-82 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo6g03798 NAM 2.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03798 - - gmx:100817193 496.893