Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03793 ATGGAAATTGATCTGAATGATTCCATCACTGAAGTTAAGAAGAATGTGTGTTGCAATGGTGAATGTGAGAAAAGTGTTTGTTGTGTTTGCACTTTATCTTCTTCTTCATCACCAACATGTTCATCTTCTAGTTCCACTTCAGCTCTTGTATCTTCATCTTATCTTGAACTATGGCATGCTTGTGCTGGACCTTTAACATCACTTCCAAAGAAAGGGAATGTTGTAGTTTATTTTCCACAAGGTCATTTGGAACAAGTTGCATCTTTGTCTCTCTTTTCTTCATTGGAAATTCCAACATATGGTCTTCAACCACAAATCTTTTGTAGGGTTGTCAATGTTCAATTACTTGCCAATAAGGAGAATGATGAGGTTTACACACAAGTTACTTTGCTTCCACAGGCAGAGTTAGCAGGGATGTGTTTGGATGACAAAGAGCCTGAAGGTTTAGAAGCAGATGGAGAGGGAAATGGAAGATCGCCTACAAAATTAGCTTCTCACATGTTTTGCAAAACACTCACTGCCTCTGATACCAGCACTCATGGAGGGTTTTCTGTTCCTCGTCGAGCTGCTGAAGATTGTTTTCCTCCTTTGGATTATAAGCAGCAGAGACCCTCTCAAGAGCTTGTTGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATCGAGGTCAGCCAAGGAGGCATCTGCTCACTACTGGCTGGAGTATTTTTGTTAGCCAAAAGAATCTTGTTTCTGGGGACGCAGTGCTCATTCTAAGGGGTGAAAATGGGGAGTTAAGATTGGGAATCAGAAGAGCTGCTCGACCGAGAAGCGGTCTGCCTGAATCAATTGTTGGTAACCAGAGTTGTTCACCTAGTTTCCTTTCTTCTGTGGCTAATGCTATTTCCGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGAGCTAGTCATGCCGATTTTGTTGTGCCTTACCAAAAGTATGTTAAAAGCATCAGGAATCCGGTGACCATAGGGACAAGATTCAAAATGAAATTTGAAATGGATGAATCTCCAGATAGAAGGTGTAGTAACGGTATAGTGACTGGAATGAGTGATTTGGATCCCTATAAATGGCCCAAGTCAAAATGGAGATGCTTGATGGTCAGATGGGATGAGGATATTAAGACTAATCATCAAGATAGAGTCTCTCCTTGGGAGATTGATCCGTCTACTTCTCTCCCTCCCTTGAACATTCAATCTTCTCGAAGACTGAAGAAACTGCGGACGGGTCTGCAAGTTGAATCACCCAGTCACCTTATCACTGGAGACAGTGGGCTTATGGACTTTGATGAGTCTGTAAGATTGCCCAAGGTCTTGCAAGGTCAAGAAAAAGCGAGTTTTATGTCACTATATTATGGATGTGACACAGTAACTAAGCAGAAAGAATTTGATATCAATTCTCTAAGACATACTAATCTTGAATCAAATGGAGCAAGAAAGATTACTTCTTCCGAGTTTATGAGGATTCAACCTTCTAGTTATGCAGACTTCACGGAAACGAACCGGTTTCCTAGGGTCTTGCAAGGTCAAGAAATATATCCATTGAGATCTCTGACAGGAAAGGTTGATCTAAACCTTAACTCTTGGGGTAAAACCAATGTTAGTTACACAAATTATAACCTGCATAATGCAACCAAACTTAACTTTCACTCATTAGGATCAGAAGTTCTTCAAAGTTCCTCTTTTCCATATGGTGATATACACAAAGTTGGTCAAGGTAGTATGCTGTGCTCCAAACCAACCAATTTCCAACTAGAGAATGCTTCATTTAATACTCCTTCAGCTCAGATAGGTACATTGAGAAATGAAGTTGGAATATCAAGTTTCGCAATCCGAAACAAGCAGAAGGTGCAGGACAATATTTCTGCTACTGCTTCTCTGGGTGCAACCATGAGGATTTCAAATGACGAAAATTTCAAGGCGAAGGTAAATCCTTGTAAACTGTTTGGATTTTCCTTATCGGCAGCAGCGGAAACCACCTCACAAAATCTACAAAACTCTGCTAAAAGAAGTTGCACAAAGGTTCACAAGCAAGGTAGCTTAGTTGGAAGAGCCATTGATCTCTCAAGATTGAGCAGCTACAATGATCTGGTGAGTGAACTAGAGAGACTATTTGGCATGGAAGGTCTTCTAAGAGATCCTGACAAAGGATGGAGAATCCTCTACACTGACAGTGAAAATGACATTATGGTTGTTGGGGATGATCCATGGCATGAGTTCTGTGATATGGCATCAAAAATCCATATATACACACAAGAAGAAGTGGAGAAGATGACAATTGGGATGATGAATGATGATAACCAGAGCTGTTTGGAACAGACACCATTGATTATGGAGGCTTCAAAGTCCTCCTCAGTGGGACAGCCAGATTCTTCTCCAACAGCAGTTAGAACCTAG 2427 0.4091 MEIDLNDSITEVKKNVCCNGECEKSVCCVCTLSSSSSPTCSSSSSTSALVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFSSLEIPTYGLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMCLDDKEPEGLEADGEGNGRSPTKLASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLILRGENGELRLGIRRAARPRSGLPESIVGNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYVKSIRNPVTIGTRFKMKFEMDESPDRRCSNGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIKTNHQDRVSPWEIDPSTSLPPLNIQSSRRLKKLRTGLQVESPSHLITGDSGLMDFDESVRLPKVLQGQEKASFMSLYYGCDTVTKQKEFDINSLRHTNLESNGARKITSSEFMRIQPSSYADFTETNRFPRVLQGQEIYPLRSLTGKVDLNLNSWGKTNVSYTNYNLHNATKLNFHSLGSEVLQSSSFPYGDIHKVGQGSMLCSKPTNFQLENASFNTPSAQIGTLRNEVGISSFAIRNKQKVQDNISATASLGATMRISNDENFKAKVNPCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCDMASKIHIYTQEEVEKMTIGMMNDDNQSCLEQTPLIMEASKSSSVGQPDSSPTAVRT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03793 808 Pfam Auxin response factor 294 376 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo6g03793 808 Gene3D - 332 404 - -
Mepo6g03793 808 Gene3D - 165 270 IPR015300 -
Mepo6g03793 808 FunFam Auxin response factor 166 270 - -
Mepo6g03793 808 SMART B3_2 168 270 IPR003340 GO:0003677
Mepo6g03793 808 FunFam Auxin response factor 331 404 - -
Mepo6g03793 808 SUPERFAMILY DNA-binding pseudobarrel domain 164 279 IPR015300 -
Mepo6g03793 808 SUPERFAMILY CAD & PB1 domains 683 759 - -
Mepo6g03793 808 CDD B3_DNA 166 268 IPR003340 GO:0003677
Mepo6g03793 808 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 53 769 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo6g03793 808 ProSiteProfiles B3 DNA-binding domain profile. 168 270 IPR003340 GO:0003677
Mepo6g03793 808 FunFam Auxin response factor 675 769 - -
Mepo6g03793 808 Pfam B3 DNA binding domain 168 269 IPR003340 GO:0003677
Mepo6g03793 808 Gene3D - 676 769 - -
Mepo6g03793 808 ProSiteProfiles PB1 domain profile. 680 764 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03793 Mepo-Chr6 50094344 50099160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03793 50 808 B3 DNA Binding Superfamily AT5G60450 59.245 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo6g03793 AUX_IAA 5.3e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03793 - - gmx:100812909 1271.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03793 6 50094344 50099160 Mepo6g03793 6 50094344 50099160 ECH
Mepo6g03793 6 50094344 50099160 Mepo2g01910 2 27943301 27949458 PCT