Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03792 ATGGATGATTTGGTTTCAAGTTGTAAGGAAAAATTGCAATATTTTCGTGTAAAGGATCTCAAAGATGTGCTTACTCAGATAGGAATTTCGAAGCAGGGAAAGAAGCAGGATCTTATCGATAGGATATTATCTATCATCTCAGATGAACAAGTTGCTAAAGTACGGGCTAAGAAGAATGCTGTTGAAAAAGAACAAGTGGTAAAATTAGTGGAGGACACATATAGAAAACTGCAGGTATCTGGAGCCACTGATATAGCATCAAAGGGGCAGGGTGCTTCAGACAGCAGTAATGTGAAAATTAAAGGTGAAGTTGAGGATTCCGTTCAATCAGCTACAAAGGTTCGATGTCTCTGTGGAAGTTCATTGGAAACAGATCTATTGATCAAGTGTGAAGATAGAAAATGCCCTGTGTCGCAACATCTCAACTGCGTTATTATTCCGGATACACCCACTGAAGGACTCCCGCCAATCCCAGATACATTTTATTGTGAAATATGTCGTCTCAGTCGTGCAGACCCGTTCTCGGTTTCAATGATGCACCCTTTACTTCCGGTGAAGTTGGCTACAACCCTTGTTCCAACAGAAGGATCCAACCCCGTGCAGAGTGTTGAGAAAACATTTCAACTTGCAAGAGCACACAAGGACATAGTATTAAAATCAGAATTTGATATTCAGGCTTGGTGCATGCTTCTGAACGACAAAGTTCCATTCAGGATGCAATGGCCACAATATGCAGACCTTGTTGTAAATGGCTATTCTGTTCGTGCAATTAATAGACCCGGTTCACAATTGCTTGGGGCTAATGGTCGCGATGATGGCCCAATTATCACACCATATATAAAAGAAGGAGTTAACAAGATTTCTTTGACGGGGTGTGACACTCGCATTTTCTGTTTGGGGGTCCGCATTGTTAGAAGGCGCACTTTGCAACAGATCTTGAACATGATTCCAAAGGAGTCCGATGGTGAGCGTTTTGAAGTTGCTCTTGCTCGTGTCTGTTGTCGTGTTGGCGGTGGAAATTCAGCTGATGATGCTGGTAGTGACAGTGATCTGGAAGTAGTTTCAGATACTTTTAGCATCAGCCTTCGTTGTCCAATGAGTGGTTCAAGAATGAAGATTGCAGGAAGATTCAAACCTTGTGTTCACATGGGTTGTTTTGATCTTGAAGTTTTTGTGGAAATGAATCAACGCTCAAGAAAGTGGCAATGCCCCATATGTCTCAAAAACTATGCACTGGAGAATATCATTATTGATCCTTATTTCAATCGCATCACTTCTATGATGAAAAACTGTGGGGAGGAGTTTACAGATGTGGAGGTGAAACCTGATGGTTATTGGCGTGTCAAGGCTAAGAGTGAAAGTGAATGCCGTGAGTTGGGGAATCTTGCTAAATGGCACTGTCCTGACGGATCCCTCCCTGTTTCTACCAGTGGAGAAGACAAGAGAGTGGAAACTTTGAATGTCAAACAGGAAGGTGTTTCAGACAGTCCTAATGGCTTAAGACTTGGCATTAGGAAAAACTGTAATGGAGATTGGGAAGTCAGCAAACCCAAGGACACAAACACCTTTTCTGATAATAGGTTGAATGCGGATTTAGGAAATCATGAAGTTGTAGTTATTCAAATGAGCAGCAGTGGCTCTGGAAGTAGATTGGATGGTGATGATCCAAGCGTAAATCAGAGTGGTGGTGGGCATACAGATTATTCTCCTACTAATGGGATTGAGACGGATTCTGTGTGTCGCGCTAATGTTGATTCAACTTATGGATATACTATTCCCAACACTTCTGCTCCGATGGCTAATGCAGAAGTTATTGTTCTTAGTGATTCTGAAGATGATGATATATTAGTATCTCCTGCAGTTGGTTGCGGAAATATTCAAACTGGTGATGCAGTTGATGCATACTCGGTGCCTCCACCTGGAATTATGGATTCATATGCAGGAGATCACAGTATTGGGGCAAATCCATGCTTTGCCGTTTTTGATAATCCCAGTGAAGGCATTTTTGGGATTCCCTCCGTCTGGCCATTGCATTCTGGAACTCAGGCAAGCTCGGGATTCCAACTATTCAGTTCTGATGTGGATGTGTCTGATGCATTGGCCCATGGTGATATTAATTGCTCCTCATCACTGAATAGTTATACACTGGCTCCTGAGACTGCTCTGGGATCTAGTACTCTAATACCAAACTCATCCACTGATCGGTCTGACACTGATTTAAATGGTGGTTTGGTTGACAATCCATTGGCATTTCATGGAGAGGATCCCTCGCTTCAGATTTTTCTCCCTACAAGACCAGCAGAATCATCTGTGCAGCATGAATTAAGAAATCACACAGATGTGTCGAATGGTGTCTGCACAGAGGATTGGATCTCTCTTAGCCTTGGGGGTGGGGCTGGTGGCAGTATTGGTGATGCTTCCACAACAAATGGTTTGAATCCCAGACCGCAAATTGCATCCAGAGAAGATGCGCCAGATTCTTTAACAGATTCTTTAACTGAGGCTGATTTGTTACTTGCTGAGACTGCTTCTTTGCTTCGTAGTGTGGATGATGCTGGATCTGACAAAGCAAGTAGGAAAAGATCAGACGGCCCTTTCTCATTTCCCCGCCAAAAACGTTCAGTAAGGCCCCGCTTGAATCTTTCTATTGGTTCAGATTCGGAGTAG 2667 0.4304 MDDLVSSCKEKLQYFRVKDLKDVLTQIGISKQGKKQDLIDRILSIISDEQVAKVRAKKNAVEKEQVVKLVEDTYRKLQVSGATDIASKGQGASDSSNVKIKGEVEDSVQSATKVRCLCGSSLETDLLIKCEDRKCPVSQHLNCVIIPDTPTEGLPPIPDTFYCEICRLSRADPFSVSMMHPLLPVKLATTLVPTEGSNPVQSVEKTFQLARAHKDIVLKSEFDIQAWCMLLNDKVPFRMQWPQYADLVVNGYSVRAINRPGSQLLGANGRDDGPIITPYIKEGVNKISLTGCDTRIFCLGVRIVRRRTLQQILNMIPKESDGERFEVALARVCCRVGGGNSADDAGSDSDLEVVSDTFSISLRCPMSGSRMKIAGRFKPCVHMGCFDLEVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMKNCGEEFTDVEVKPDGYWRVKAKSESECRELGNLAKWHCPDGSLPVSTSGEDKRVETLNVKQEGVSDSPNGLRLGIRKNCNGDWEVSKPKDTNTFSDNRLNADLGNHEVVVIQMSSSGSGSRLDGDDPSVNQSGGGHTDYSPTNGIETDSVCRANVDSTYGYTIPNTSAPMANAEVIVLSDSEDDDILVSPAVGCGNIQTGDAVDAYSVPPPGIMDSYAGDHSIGANPCFAVFDNPSEGIFGIPSVWPLHSGTQASSGFQLFSSDVDVSDALAHGDINCSSSLNSYTLAPETALGSSTLIPNSSTDRSDTDLNGGLVDNPLAFHGEDPSLQIFLPTRPAESSVQHELRNHTDVSNGVCTEDWISLSLGGGAGGSIGDASTTNGLNPRPQIASREDAPDSLTDSLTEADLLLAETASLLRSVDDAGSDKASRKRSDGPFSFPRQKRSVRPRLNLSIGSDSE 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03792 888 FunFam E3 SUMO-protein ligase SIZ1 1 67 - -
Mepo6g03792 888 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 10 636 - -
Mepo6g03792 888 SUPERFAMILY SAP domain 4 65 IPR036361 -
Mepo6g03792 888 CDD PHD_Bye1p_SIZ1_like 115 166 - -
Mepo6g03792 888 Gene3D SAP domain 1 65 IPR036361 -
Mepo6g03792 888 MobiDBLite consensus disorder prediction 852 867 - -
Mepo6g03792 888 Pfam MIZ/SP-RING zinc finger 360 408 IPR004181 GO:0008270
Mepo6g03792 888 ProSiteProfiles SAP motif profile. 12 46 IPR003034 -
Mepo6g03792 888 Pfam SAP domain 14 43 IPR003034 -
Mepo6g03792 888 ProSitePatterns Zinc finger PHD-type signature. 116 166 IPR019786 -
Mepo6g03792 888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 172 IPR013083 -
Mepo6g03792 888 CDD SP-RING_Siz-like 361 410 IPR031141 -
Mepo6g03792 888 MobiDBLite consensus disorder prediction 802 828 - -
Mepo6g03792 888 SMART sap_9 12 46 IPR003034 -
Mepo6g03792 888 SUPERFAMILY FYVE/PHD zinc finger 109 170 IPR011011 -
Mepo6g03792 888 MobiDBLite consensus disorder prediction 849 888 - -
Mepo6g03792 888 MobiDBLite consensus disorder prediction 544 576 - -
Mepo6g03792 888 SMART PHD_3 115 167 IPR001965 -
Mepo6g03792 888 ProSiteProfiles Zinc finger SP-RING-type profile. 347 430 IPR004181 GO:0008270
Mepo6g03792 888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 338 448 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03792 Mepo-Chr6 50082916 50092869 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03792 - - tpra:123894614 1331.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03792 6 50082916 50092869 Mepo6g03792 6 50082916 50092869 ECH
Mepo6g03792 6 50082916 50092869 Mepo2g01913 2 27970145 27980241 PCT