Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03779 ATGGAGAATGACACAAACACTCAAATTTCCTCTCTTCCATTTTCTCAATCTCCAACATCTTCACAACCACCTATGGCTCCTCAAGTTGTCATGAGTCCTTGTGCTGCTTGCAAGATTTTGAGAAGAAGATGTGCTGAGAAATGTGTTTTGGCACCTTATTTCCCTCCTACTGAACCTTCCAAATTTACCACTGCTCACCGTGTATTTGGTGCCAGCAACATCATCAAGTTCTTACAGGAACTTCCAGAGTCTCAAAGAGCTGATGCAGTTAGTAGCATGGTTTATGAGGCTAGTGCAAGAATAAGAGACCCTGTGTATGGATGTGCAGGTGCAATTTGTCACCTCCAAAAGCAAGTCAATGAGCTTCAAGCACAACTAGCTAAGTCACAAGCTGAGCTTATTAACATGCAATTACAACAATCCAATCTCCTAGCTTTGATTTGTATGGAAATGAAAGAAACTACTCCAAATGAATCTCCACAACAGTCAGTGGACAACTTCATTTCAAGTCCTGCCTACAGCAGTGATTATCAAAATAATCTCAACTTCTTTGAGGACAACACTAGCCAAAATTCATTGTGGGAGCCTCTTTGGACATGA 600 0.4117 MENDTNTQISSLPFSQSPTSSQPPMAPQVVMSPCAACKILRRRCAEKCVLAPYFPPTEPSKFTTAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQVNELQAQLAKSQAELINMQLQQSNLLALICMEMKETTPNESPQQSVDNFISSPAYSSDYQNNLNFFEDNTSQNSLWEPLWT 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03779 199 ProSiteProfiles LOB domain profile. 32 133 IPR004883 -
Mepo6g03779 199 Coils Coil 119 139 - -
Mepo6g03779 199 Pfam Lateral organ boundaries (LOB) domain 33 130 IPR004883 -
Mepo6g03779 199 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 161 - -
Mepo6g03779 199 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03779 Mepo-Chr6 49982411 49984842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03779 29 199 AS2 family AT2G28500 68.108 8.40e-83 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo6g03779 LOB 2.1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03779 - - gmx:100819336 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03779 6 49982411 49984842 Mepo6g03779 6 49982411 49984842 ECH
Mepo6g03779 6 49982411 49984842 Mepo2g01924 2 28199964 28202216 PCT