Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03766 ATGTTAGATCTTAATCTGAATGAAGATTACGAAGACTCGATCATGCTGGTGGAAAAACTTCCAGAAGCTTCATCAGGAACTTCGAATTCATCCATAGTGAATGCAGAGGCTTCAAGTAACATCACCGGTGATGAAGACTCGTGTTCAACACGCGCCGGTGGTGTTTTCACTTTCAACTTCGGTATCCTGAAGGTGGAAGGAGGTAACGATGATGTTGTTGTTCCGACTAAGGAGTTTTTTCCGGTGAGTGCCGAGACTTCAACGATGATGATTCCGGCAAGGAAGAGCGCGATGGATCTTACAATGGATCGTCGTCTTGGCGGTGAAAATGGAGTTGTTGAAGTTCAGCAAAAGCCTCAGGTGAAGAAGAGTAGGAGAGGTCCGAGGTCGAGGAGCTCGCAGTATAGAGGAGTCACGTTCTATCGTAGAACTGGAAGATGGGAATCGCATATCTGGGATTGTGGGAAGCAAGTTTATTTGGGTGGATTTGACACGGCTCATGCTGCTGCTAGAGCCTATGATCGAGCTGCTATAAAGTTCAGGGGACTTGATGCTGACATTAACTTCAATCTAGTTGAGTATGAGGAAGATATGAATCAGATGAAGAATCTATCAAAGGAGGAATTTGTGCACATTCTACGTCGCCACAGTAATGGTTTCTCAAGGGGGAGTTCAAAATACAGAGGAGTAACGCTTCACAAATGTGGTCGTTGGGAAGCTAGAATGGGACAACTCCTTGGCAAAAAGGCTTATGACAAAGCAGCTCTAAAATGCAATGGAAGAGAGGCAGTGACAAACTTTGAGCCAAGTACATATGAAAATGAGATGAAACCAGAAGCTATTAATGAAGGTAGCAGTCACAATCTTGACCTTAATTTGGGCATGGCGACTCCAGGATATGAACCCAAAGAAAACAAAGGATATCGTCAATTTCAGACCGTTCCTTCTTACAACATGCATCCTGGAAGGAATTTGAAGATGGAGACTAATGTTAATTCAGTTATCGGTGACCCGTCTTTGAAAAAGCTGGTTGTAACTGAACAGCGTCCTCCCATGTGGAATGCCACGTTTTCTAGTTTCTTTCCCAATGAGCAGGAAAGGGCAGAGAGAATTGGCATTGATCCTTCAAAAGGACACCCGAACTGGGCGTGGCAAGGGCATAGTCATGGCACTGTTTCCCCAGTACCACAATTCTCTACTGCAGCATCATCAGGATTCTCCATTTCAGCTACCTTTCCACCAAATGCAATCTTTCAAACACAACCAATGAACTCAATCCCCCAGACACTCTGTTTCACTCCTGGTAGCAATGCATCTCAATACTATTACCAGGTTAAGTCCTCACAGGCACCACCATAG 1359 0.4467 MLDLNLNEDYEDSIMLVEKLPEASSGTSNSSIVNAEASSNITGDEDSCSTRAGGVFTFNFGILKVEGGNDDVVVPTKEFFPVSAETSTMMIPARKSAMDLTMDRRLGGENGVVEVQQKPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLVEYEEDMNQMKNLSKEEFVHILRRHSNGFSRGSSKYRGVTLHKCGRWEARMGQLLGKKAYDKAALKCNGREAVTNFEPSTYENEMKPEAINEGSSHNLDLNLGMATPGYEPKENKGYRQFQTVPSYNMHPGRNLKMETNVNSVIGDPSLKKLVVTEQRPPMWNATFSSFFPNEQERAERIGIDPSKGHPNWAWQGHSHGTVSPVPQFSTAASSGFSISATFPPNAIFQTQPMNSIPQTLCFTPGSNASQYYYQVKSSQAPP 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03766 452 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 104 307 - -
Mepo6g03766 452 SMART rav1_2 226 274 IPR001471 GO:0003700|GO:0006355
Mepo6g03766 452 SMART rav1_2 134 196 IPR001471 GO:0003700|GO:0006355
Mepo6g03766 452 MobiDBLite consensus disorder prediction 108 135 - -
Mepo6g03766 452 CDD AP2 225 270 IPR001471 GO:0003700|GO:0006355
Mepo6g03766 452 SUPERFAMILY DNA-binding domain 225 269 IPR016177 GO:0003677
Mepo6g03766 452 SUPERFAMILY DNA-binding domain 133 190 IPR016177 GO:0003677
Mepo6g03766 452 FunFam AP2-like ethylene-responsive transcription factor 133 192 - -
Mepo6g03766 452 CDD AP2 134 189 IPR001471 GO:0003700|GO:0006355
Mepo6g03766 452 Gene3D AP2/ERF domain 225 269 IPR036955 GO:0003700|GO:0006355
Mepo6g03766 452 Gene3D AP2/ERF domain 133 192 IPR036955 GO:0003700|GO:0006355
Mepo6g03766 452 Pfam AP2 domain 134 182 IPR001471 GO:0003700|GO:0006355
Mepo6g03766 452 ProSiteProfiles AP2/ERF domain profile. 134 190 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03766 Mepo-Chr6 49813736 49817651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03766 1 452 AP2-EREBP Transcription Factor Family AT5G60120 44.960 2.17e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo6g03766 AP2 2.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03766 K09284 - gmx:100777102 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03766 6 49813736 49817651 Mepo6g03766 6 49813736 49817651 ECH
Mepo6g03766 6 49813736 49817651 Mepo2g01950 2 28447196 28450959 PCT