LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g03759	ATGGAGGAGACACGAGAAGATACAGGGTCGACAGAGCAAGGGCCATCAAATGCTAACATATCATGGTGGCCTTCGGATTTTGTTGAAAAATTTGGATCTGTCGCTTTAGATTCTCAAGACCAGACATTAAAAAATAACGAATCTCCTAGACACTCTGACAAAGATGTTTTGTCACCTCTGAAAGCATCACAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCACTCATCCCGGAGACAAGACTCAAGGAGCTTTTTGATAGTATTCCTAGCTTGGACGAACTTCATGCTTTGGGTGGAGAGGGTTATAGGGCTGATATCATTCTCGTGGATGTAGAGAAAGATAAAAAGCTATCCATGTTGAAGCAACTGATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCAGCTGCAATGATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGACCCGGTGTGGAAAGTCCAGCAAAAGCCGCGTTTGATGAAACCTCTCACATTCTTGAGAATCGTGGTGTCCAGATGCTGGGGCAAATAAAGCACGGTTCATGTCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTGGGTCTTGAAAGCAGGCTCATGGTGGGCTTGCCCAATGACGGGGCTGTCGAATGTGTAGATTCATACAAGCATATGTCTGTGATAGTTGAATTAAATTCAGTGGAAATGCTGGTTGACCTTATGAGATTTCCGGGTCAATTGTTACCAAAATCAACCAAGGCAGTTTTTATGAGTCATATATCCGCAGCAGGAGAAAGTGATTCAGCAGAGAATGATTCTTGTGATTCGCCATTAGAACCAAATAGTCCTCTATTTGGAGTTTCTGAGAGTGCTGAGAAGGAGGAAAACCTTCAGTTCAATAGAAGATTTGAAGTGTCTTCAAATGTAACAGGCCTTTCCCTGAGAAATATGATGTTACGATCAAATAGCAGTTTGAGTTTGTCTCATAGTGAACCCAATATTGCAACTGCGTTTGGTCGCCGTAGTCGGAGAAAGGCCATTGCCGAACAGAGGACTGCTAGTTCAAGTCCAGAACACCCATCATTTCGAGCACGTGCACGGTCCATGCTTAGTGGTGATAGGACAGAATTCAGAGATTTTGCTGATGATCAAGCTACATCAAGATCCAGCTATAGATCAGATGGTGCATCCTCATCAGAAGCTCGTAGGATACGACGAAGAAGCATCAGCATTACGCCAGAGATTGGGGATGATATTGTAAGGGCTGTACGTGCAATGAATGAAACACTAAAGCAAAATCGTCTTATGAGAGAACGAGGGGATGATAACTCATTCTCCCATTCTCCGAGCAATAGAAGTAGTGATGCAGATCTTCATAAAAATGCGTCAAATTTCCATCTTGATGGTCATGATGAAAGGTCCACCTTATATTCTTTTCAGCGTGACCAAGTAACATCACAAAAGGCAATGTCATTACCAACTTCACCACATGACTATAGAAGTCAAGCTTCTGAGAGAAGCGAGCTATCAAGATATGGAGTTAATGATGAAATGGAATCGACCTGGAATAAAGTACTTGAATCTCAAATGTTCAATGGCAAACCTTTATTGGCATATGAAGCATGGAATATTGACTTCTCAGAATTAACTGTTGGAACTCGTGTGGGGATCGGCTTCTTTGGAGAAGTCTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACCGCTGAAAACATGGAAGATTTCTGCAATGAAATATCTATTCTGAGCCGACTCCGACATCCTAATGTCATCTTATTTCTTGGTGCATGCACAAAGCCTCCACGTTTATCTATGGTCACAGAATATATGGAGATGGGATCATTGTATTACTTGATACATTTGAGCGGTCAGAAGAAAAGGCTCAGTTGGCGGAGACGACTAAAGATGTTGCGTGACATATGCAGGGGTTTGATGTGCATACACCGTATGAAGATTGTTCACCGTGATTTGAAAAGTGCAAATTGTCTAGTGAACAAGCATTGGACTGTGAAAATCTGTGATTTTGGGCTTTCAAGAATAATGTTAGATCCTCCAATCAGAGATTCTTCGTCGGCCGGAACTCCAGAATGGATGGCTCCTGAACTCATCCGAAATGAACCATTCGATGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAGCTGTGCACCTTGAACAGACCATGGGAAGGCGTACCACCTGAGAGGGTGGTTTATTCTGTTGCTCATGAGGGTTCCAGAATGGAGATTCCTGAAGGCCCACTAGGCAGGCTGATTTCAGATTGTTGGGCAGACGCACATGAACGGCCAAGTTGTGATGAGATTCTCTCTCGTTTGGTGGACATGGAGTATTCATTGTGTTGA	2442	0.4242	MEETREDTGSTEQGPSNANISWWPSDFVEKFGSVALDSQDQTLKNNESPRHSDKDVLSPLKASQILWRTGMLSEPIPNGFYSLIPETRLKELFDSIPSLDELHALGGEGYRADIILVDVEKDKKLSMLKQLIVALVKGLNSNPAAMIKKIAGLVSDFYKRPGVESPAKAAFDETSHILENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNDGAVECVDSYKHMSVIVELNSVEMLVDLMRFPGQLLPKSTKAVFMSHISAAGESDSAENDSCDSPLEPNSPLFGVSESAEKEENLQFNRRFEVSSNVTGLSLRNMMLRSNSSLSLSHSEPNIATAFGRRSRRKAIAEQRTASSSPEHPSFRARARSMLSGDRTEFRDFADDQATSRSSYRSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLMRERGDDNSFSHSPSNRSSDADLHKNASNFHLDGHDERSTLYSFQRDQVTSQKAMSLPTSPHDYRSQASERSELSRYGVNDEMESTWNKVLESQMFNGKPLLAYEAWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKRLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMLDPPIRDSSSAGTPEWMAPELIRNEPFDEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYSVAHEGSRMEIPEGPLGRLISDCWADAHERPSCDEILSRLVDMEYSLC	813

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g03759	813	Gene3D	Transferase(Phosphotransferase) domain 1	636	811	-	-
	Mepo6g03759	813	SMART	serkin_6	557	806	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g03759	813	MobiDBLite	consensus disorder prediction	493	508	-	-
	Mepo6g03759	813	SUPERFAMILY	Protein kinase-like (PK-like)	533	805	IPR011009	-
	Mepo6g03759	813	MobiDBLite	consensus disorder prediction	344	413	-	-
	Mepo6g03759	813	Gene3D	Phosphorylase Kinase; domain 1	550	635	-	-
	Mepo6g03759	813	MobiDBLite	consensus disorder prediction	439	477	-	-
	Mepo6g03759	813	ProSitePatterns	Protein kinases ATP-binding region signature.	563	584	IPR017441	GO:0005524
	Mepo6g03759	813	MobiDBLite	consensus disorder prediction	377	393	-	-
	Mepo6g03759	813	MobiDBLite	consensus disorder prediction	493	516	-	-
	Mepo6g03759	813	CDD	STKc_MAP3K-like	563	805	-	-
	Mepo6g03759	813	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	676	688	IPR008271	GO:0004672\|GO:0006468
	Mepo6g03759	813	Pfam	Ethylene-responsive protein kinase Le-CTR1	62	255	-	-
	Mepo6g03759	813	MobiDBLite	consensus disorder prediction	1	22	-	-
	Mepo6g03759	813	MobiDBLite	consensus disorder prediction	439	453	-	-
	Mepo6g03759	813	Pfam	Protein tyrosine and serine/threonine kinase	558	805	IPR001245	GO:0004672\|GO:0006468
	Mepo6g03759	813	FunFam	Serine/threonine-protein kinase isoform 1	547	635	-	-
	Mepo6g03759	813	ProSiteProfiles	Protein kinase domain profile.	557	811	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g03759	813	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	339	805	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g03759	Mepo-Chr6	49733364	49751388	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g03759	1	813	MAP Kinase Kinase Kinase	AT3G58640	70.339	0.0	1174

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-1	Mepo6g03759		PK_Tyr_Ser-Thr	1.8e-59	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g03759	-		-	gmx:100803469	1415.21