Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03732 ATGGAAATGGATGATTTTGCTTCAAGTAGAATTAATGATGGTTGTTTTCAAGGTGTAAATGGAAATGGACATGGTTCATCTTCTTCACTGGTTTTGGATAGAGAAAAAGGAGAGCTTGTGGAGGCAGCTGTGAAATTGGAAAGAAAGGGTGTTTCACCTGAGAGAAGTATTGAAGCTTTGAAGAATCATAGTGAAGCAGAGAGGAGGAGAAGAGCAAGAATTAATTCACATCTTGATACTCTTCGTAGTGGTATTCCATGTGCTAATAAGTTGGACAAAGCATCCTTACTAGCTGAAGTTATTACACATTTGAAAGAGCTGAAAACAAATGCAGCACAAGCAAGTGAAGGGTTAGTTATTCCAAAAGACAGTGATGAGATAAGAGTTGAATCACAAGAAGGTGGGTTAAATGGTTTCCCTTATTCAATTAGAGCATCACTATGTTGTGAATACAAACCAGGTTTATTGTCTGATATAAGAAAAGCACTTGATGCCCTTCATCTTATGATAATAAGGGCAGAGATTGCAACTTTGGGAGGTAGAATGAAGAATGTCTTTGTCATAATTAGCTGCAAAGAACAGAATTTTGAAGATGCCGAGTATCGACAATTTCTTGCTGGATCGGTTCATCAAGCTCTTAGATCTGTACTTGATAGATTTTCTGTTTCACAAGATATCTTAGAAACTAGAAAGAGAAGGAGGATTTCTATATTCAGTTCTTCATCTTTAGGTGATTTCTTATAA 744 0.3642 MEMDDFASSRINDGCFQGVNGNGHGSSSSLVLDREKGELVEAAVKLERKGVSPERSIEALKNHSEAERRRRARINSHLDTLRSGIPCANKLDKASLLAEVITHLKELKTNAAQASEGLVIPKDSDEIRVESQEGGLNGFPYSIRASLCCEYKPGLLSDIRKALDALHLMIIRAEIATLGGRMKNVFVIISCKEQNFEDAEYRQFLAGSVHQALRSVLDRFSVSQDILETRKRRRISIFSSSSLGDFL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03732 247 PANTHER TRANSCRIPTION FACTOR BHLH30 24 239 IPR045847 GO:0003700|GO:0006355
Mepo6g03732 247 Pfam Helix-loop-helix DNA-binding domain 62 107 IPR011598 GO:0046983
Mepo6g03732 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 107 IPR011598 GO:0046983
Mepo6g03732 247 SUPERFAMILY ACT-like 146 223 IPR045865 -
Mepo6g03732 247 Gene3D - 54 116 IPR036638 GO:0046983
Mepo6g03732 247 SMART finulus 64 113 IPR011598 GO:0046983
Mepo6g03732 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 51 110 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03732 Mepo-Chr6 49492629 49494803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03732 45 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.327 1.09e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g03732 HLH 2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03732 - - gmx:100783322 384.415