Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03700 ATGGCACAATTACCTCCTAAGATCCCAAACATGTCACCTAGTTGGCCAGAATTTTCCACACACCAAAAAAATATTATGCCAACATCAATTTCAACCAATAACATTGTCACTACAAACAATTATCAGAATCAAAACCCTTCATGGGTGGACGAGTTCCTCGACTTTTCCTCGGCAAGGCGAGGCGCTCATAGAAGGTCGGTCAGCGATTCAGTCACATTCTTAGAAACACCAATGCTCGATGGAAAACACGATGGTAACAACAATGACAACGAGTTCGACAAGTTTGATGATGAACAATTTTTGTCCATGTTCAGTGATGAAATATCTGGTGTCAATAACATGCCACCAACATTGTCTTCGTCGAACCCTTCGAGTCCTTCAGATCAGAATTTTGTCAATGATGATAATGAGAAAGAGAGGAATAAACAAGAGAAGAAGGAGAATGATTTAGGAGATATGAAGAAAGAGGAAGATGAGAAGCAATTGAAATATGAACCTGATGAGGTAGAAAGCCAATGCAAACAGGAAAATTCACAGCCTCAAAGTAACAACAACAATGTCACTTCTTCTAATGATAGAATTACTGATCCAAAGAGAGTCAAAAGAATCTTGGCAAATAGGCAATCAGCACAAAGGTCACGTGTGAGGAAGCTGCAATACATATCAGAGCTTGAACGTAGTGTAACTTCATTACAGGCTGAAGTTTCAGTGCTATCTCCAAGAGTTGCATTTTTGGATCATCAACGCTTGCTTCTAAATGTTGACAACAGTGCTCTCAAGCAAAGAATTGCAGCCCTTGCACAAGACAAGCTTTTCAAAGATGCTCATCAAGAGGCACTGAAGAGGGAGATAGAAAGATTAAGACAAGTATATCACCATCAGAATCTCAAGAAAATGGAAAATGCTAATGGATCACCCTTACCATCCCCATCACAAAAGCCAATATGTGATTCTCAAACAGAAAACGAACAACTTCTCAATGGAAACACATGTGCATCAGTGGCATCAAAAGAAAGGGTGGAAGAAACAGTTGTGTCTGCTTTAACATGA 1050 0.3962 MAQLPPKIPNMSPSWPEFSTHQKNIMPTSISTNNIVTTNNYQNQNPSWVDEFLDFSSARRGAHRRSVSDSVTFLETPMLDGKHDGNNNDNEFDKFDDEQFLSMFSDEISGVNNMPPTLSSSNPSSPSDQNFVNDDNEKERNKQEKKENDLGDMKKEEDEKQLKYEPDEVESQCKQENSQPQSNNNNVTSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKLFKDAHQEALKREIERLRQVYHHQNLKKMENANGSPLPSPSQKPICDSQTENEQLLNGNTCASVASKERVEETVVSALT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03700 349 MobiDBLite consensus disorder prediction 108 131 - -
Mepo6g03700 349 CDD bZIP_plant_RF2 199 249 IPR044759 GO:0003700|GO:0006355
Mepo6g03700 349 PANTHER BASIC LEUCINE ZIPPER 34 1 316 - -
Mepo6g03700 349 Coils Coil 136 156 - -
Mepo6g03700 349 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 196 248 IPR004827 GO:0003700|GO:0006355
Mepo6g03700 349 MobiDBLite consensus disorder prediction 132 172 - -
Mepo6g03700 349 MobiDBLite consensus disorder prediction 1 21 - -
Mepo6g03700 349 FunFam Basic leucine zipper 61 197 270 - -
Mepo6g03700 349 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 201 216 IPR004827 GO:0003700|GO:0006355
Mepo6g03700 349 SMART brlzneu 194 258 IPR004827 GO:0003700|GO:0006355
Mepo6g03700 349 MobiDBLite consensus disorder prediction 108 199 - -
Mepo6g03700 349 Pfam bZIP transcription factor 198 242 IPR004827 GO:0003700|GO:0006355
Mepo6g03700 349 Coils Coil 277 297 - -
Mepo6g03700 349 MobiDBLite consensus disorder prediction 173 193 - -
Mepo6g03700 349 Gene3D - 197 268 - -
Mepo6g03700 349 SUPERFAMILY Leucine zipper domain 198 252 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03700 Mepo-Chr6 49187001 49190254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03700 1 275 bZIP Transcription Factor Family AT3G58120 57.586 8.55e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo6g03700 bZIP_2 4.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03700 - - gmx:100101874 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03700 6 49187001 49190254 Mepo6g03700 6 49187001 49190254 ECH