Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03687 ATGGCAACAAACAGATTCGTGTGTGAAATTTGTCTAAAGGGTTTTCAAAGGGATCAAAATCTTCAACTTCATCGACGTGGACATAACCTTCCATGGAAGCTGAAGCAAAGAACAAGTAAAGAAATAAGGAAGAGAGTGTATGTGTGCCCAGAGAAGACATGTGTTCACAATCATCCTTCAAGGGCTTTGGGAGATTTAACTGGGATAAAGAAGCACTTTTGTAGGAAGCACGGTGAGAAGAAGTGGAAGTGTGAGAAGTGCTCAAAGTTTTATGCTGTTCAATCGGATTGGAAAGCACACTCAAAGACTTGTGGTACTAGAGAATACAAATGTGACTGTGGCACTATTTTTTCAAGGAGGGATAGTTTTGTCACTCACAGGGCATTCTGTGATGCCTTAGCAGAAGAAACAGCTAGAATAAACGGATCAACAAACATAAACAACTCATTACTAGGAATGGGAGGTAACAACATTGGTAATTACAACATAATGCAAAGTTCTCTTGTCCCAAACATAGGAACTCATTTTTCTTCAATTTTCAAACCAATCTCATGCACAAATCAAGAAACAACTAATCAAACATCTAGGTCAGGTTTATCTCTTTGGATGTCTCAAACATCTCATGACACAATATTAGCTAATAATAGCAATTTGCATGAGATTCATCAACTTGGGTCCACTACAAGCACAGGAGCAATATATAGTGGAAATGAAAAATGGGTGTTTGGAAATAAATTCTACTCTAATAATGAATGTCAAGAGTTAACTAGTTCTATTTCACTTCCACTAGTCAATAATAATATTGATAATAAGGATAGTACTACAAACAATCTTGTTAGTGTTCCTTCCTTGTATAGCTCACAACACCAATCACAATCTCAACATCAAACAACCTCAGCAAACATGTCAGCAACAGCTTTGTTGCAAAAAGCTGCTCAAATTGGGACAACTTCAACTGATTCATTGTTCCTTGGAAGCTTAGGTTTGAGATGCAATAGTCCAAGTCAAGATCATGGGAACAAATTTTGTGGGGTGTATGGTTCAAGTTCAGTACTTACAACAAGTGATCTTGGGTCAGCAGAGAGCTACATTTCAGATGAATTGTCACAAATGCCCCCCATGAAACGACGCCGCATGCCGAATGAAGAGAGTGTTTGGGGACAAACTAGGGATTTTCTTGGTGTTGGTGGTGCTCACCATTTGCCACAGTTCATCAATCAACGGATGGATTTGATTTGA 1239 0.385 MATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFVTHRAFCDALAEETARINGSTNINNSLLGMGGNNIGNYNIMQSSLVPNIGTHFSSIFKPISCTNQETTNQTSRSGLSLWMSQTSHDTILANNSNLHEIHQLGSTTSTGAIYSGNEKWVFGNKFYSNNECQELTSSISLPLVNNNIDNKDSTTNNLVSVPSLYSSQHQSQSQHQTTSANMSATALLQKAAQIGTTSTDSLFLGSLGLRCNSPSQDHGNKFCGVYGSSSVLTTSDLGSAESYISDELSQMPPMKRRRMPNEESVWGQTRDFLGVGGAHHLPQFINQRMDLI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03687 412 FunFam protein indeterminate-domain 5, chloroplastic-like 60 139 - -
Mepo6g03687 412 FunFam Zinc finger protein MAGPIE 2 29 - -
Mepo6g03687 412 SUPERFAMILY beta-beta-alpha zinc fingers 5 102 IPR036236 -
Mepo6g03687 412 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Mepo6g03687 412 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Mepo6g03687 412 Gene3D Classic Zinc Finger 39 130 - -
Mepo6g03687 412 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 399 IPR031140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03687 Mepo-Chr6 49112909 49114980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03687 1 396 IDZ Gene Family AT1G03840 49.661 9.65e-119 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo6g03687 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03687 6 49112909 49114980 Mepo6g03687 6 49112909 49114980 ECH