Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03685 ATGACTCAGTGTAGTTACCCTGAAAATAATCATAGTACTATCCTTATGGAGAGACGCAAAGATAGCTTAATCAGAACTTGTCCTACATGTGGTCATCATATCAAATGCCAAGATCAGGGTGCTGGAATTCATGAGTTACCTGGATTACCTGCTGGGGTGAAGTTTGATCCAACTGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTGAGGTCTGATATTCAAATGCTTCATCCTTTAATTGATGAATTCATCCCTACTCTTGAAGGAGAGAATGGAATCTGCTGTACTCATCCAGAGAAGTTACCAGGTGTCGGCAAAGATGGATTGATTCGACATTTCTTTCACAGGCCATCGAAAGCATACACAACAGGAACAAGAAAAAGAAGAAAAGTGCACACAGATGCTGATGGAAGTGAGACAAGATGGCACAAAACAGGTAAAACAAGGCCAGTTTTCGTGAATGGCAAGTTAAAAGGTTATAAGAAAATCCTTGTGCTTTACACAAACTACAGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTTATGCACCAATACCATCTTGGAAACAATGAAGAAGAGAAAGAAGGGGAATTGGTAGTTTCCAAAGTTTTCTACCAAACACAGCCTAGACAATGTGGTGGTTCATTGATGAAAGATTCAGCATCATTTTCTGATAAAAAACTCAATGGTGATCAAGGTGTGCATGAGGTGGTTAATCATAAAAACAGTGGATTTGTTGAATACTATAGTACTTCTTTCATATCTTTTGATCAAGGGGAACAACATAGATCAAATAATGCTCAAGGGATTTCTCATTTTCCTGTCCATGATGGTACTTCTTTCATTCCTTGA 858 0.3823 MTQCSYPENNHSTILMERRKDSLIRTCPTCGHHIKCQDQGAGIHELPGLPAGVKFDPTDQEILEHLEAKVRSDIQMLHPLIDEFIPTLEGENGICCTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVFVNGKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGGSLMKDSASFSDKKLNGDQGVHEVVNHKNSGFVEYYSTSFISFDQGEQHRSNNAQGISHFPVHDGTSFIP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03685 285 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Mepo6g03685 285 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Mepo6g03685 285 FunFam NAC domain-containing protein 73 58 212 - -
Mepo6g03685 285 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
Mepo6g03685 285 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Mepo6g03685 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 20 250 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03685 Mepo-Chr6 49104501 49106532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03685 25 285 NAC Transcription Factor Family AT4G28500 62.989 5.06e-118 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo6g03685 NAM 6.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03685 - - gmx:100791648 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03685 6 49104501 49106532 Mepo6g03685 6 49104501 49106532 ECH