Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03680 ATGCTAGCAGTGGCACCATTGAGTAGCATTAGAGATGAAAGCCAAAGAGAAATGGAGGAGAATTTATCAATTGAGACATGTGACTTTGCTGATCTTTCTGAAGGGAACTTATTGGAAAGCATCAATTTCGAATTCGATGATGATTTCTTCGTATGCTTCAACGACGGAGATGTGTTACCGGATCTTGAGATGGACCCGGAAATGCTTGCTGAATTCTCCCTCAGCAGCGGTGAGGAATCGGATATAAATTCATCGGGCGCAAATAGCAAATCTTGTAATGATGGGAACATGGTTAGTATTGAGAGAAAATTACAAGATGAAGAGAAAGTAGTTTCTTCTTCAGATTCAGGTTCGAGTCGTGTGGAAGAGATAATTAGCAAAAGAGATGAATCCGTTGTGCCGAATCCATTGCCTAAGCAAGGTGAGAATGGAAGAAAATCATCATCTCAATCAAAGAATAATCCTCATGGGAAGAGAAAAGTGAAGGTGGATTGGACCCCAGAATTGCACAGAAGATTCGTACAAGCAGTAGAGCAGCTAGGTGTGGATAAAGCTGTACCTTCAAGAATTTTGGAAATTATGGGAATTGACTGCCTCACCCGCCATAACATCGCCAGCCACCTTCAAAAATATAGATCGCATAGGAAACATTTGTTAGCACGTGAAGCTGAAGCAGCAAGCTGGAGTCAAAGGAGGCAATTGTTTGGAACAAATAGAGGAGTTGGAGGAAAAAGAGATATTGTGAATCATTGGGTTGCACCAACCATGGGTTTCCCTCCCGTGCCACCAGTACACCATTTTAGACCTTTACATGTATGGGGACACCATCCCGTGGATCAGTCATTTATGCATATGTGGCCTAAATATTCGCCGCACCAGCCATCGGCTAATTGGGCACCTGCACGCCCGGCTCCACCTCCTAACGCTTCGTATTGGCACCAACGGGCTCCAAATGCACCAACCGCAGGAACACCGTGCTTTCCACAGCCTCTGACAACAACGAGATTTGGCTCTCCAACTGTTCCAGGCATTCCACCACCCCATGCCATGTATCAATTAGATCCCGGTGCTGTCGTCCCCGCCGGTCAACCATCTCCTCAGCCGCTCTTAGACTTCCATCCGTCAAAAGAGAGCATCGACGCAGCTATTAGTGATGTATTATCAAAACCATATTTACCGTTGCCTCTTGGCCTTAAAGCTCCAGGACTTGAAGGTGTGATGGGTGAATTACAGAAACAAGGAATTCCAAATATTCCACCATCTTGTGCTTGA 1272 0.4528 MLAVAPLSSIRDESQREMEENLSIETCDFADLSEGNLLESINFEFDDDFFVCFNDGDVLPDLEMDPEMLAEFSLSSGEESDINSSGANSKSCNDGNMVSIERKLQDEEKVVSSSDSGSSRVEEIISKRDESVVPNPLPKQGENGRKSSSQSKNNPHGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQLFGTNRGVGGKRDIVNHWVAPTMGFPPVPPVHHFRPLHVWGHHPVDQSFMHMWPKYSPHQPSANWAPARPAPPPNASYWHQRAPNAPTAGTPCFPQPLTTTRFGSPTVPGIPPPHAMYQLDPGAVVPAGQPSPQPLLDFHPSKESIDAAISDVLSKPYLPLPLGLKAPGLEGVMGELQKQGIPNIPPSCA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03680 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 216 IPR017930 -
Mepo6g03680 423 MobiDBLite consensus disorder prediction 73 162 - -
Mepo6g03680 423 Pfam Myb-like DNA-binding domain 163 212 IPR001005 -
Mepo6g03680 423 MobiDBLite consensus disorder prediction 76 98 - -
Mepo6g03680 423 FunFam Two-component response regulator 156 219 - -
Mepo6g03680 423 SUPERFAMILY Homeodomain-like 158 217 IPR009057 -
Mepo6g03680 423 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 422 IPR044825 GO:0003700|GO:0045893
Mepo6g03680 423 NCBIfam myb-like DNA-binding domain, SHAQKYF class 160 214 IPR006447 GO:0003677
Mepo6g03680 423 Gene3D - 157 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03680 Mepo-Chr6 49016523 49022211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03680 28 329 G2-like Transcription Factor Family AT5G44190 42.105 1.54e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo6g03680 Myb_DNA-binding 5.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03680 - - gmx:100775671 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03680 6 49016523 49022211 Mepo6g03680 6 49016523 49022211 ECH