Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03661 ATGGACCATGATCAACAAGAATATCAACCTTCTTCAACCAGAGTCGAAAGAAAGGTTGTTGAGAAAAATAGGAGAAATCAGATGAAGATCCTCTATTCCAAACTTAACTCTCTTCTTCCTAGCTATAATTCCAAGGAAGCATTACCATTACCTGATCAAGTAGATGAGGCTATAAACTACATAAAGAGGCTAAAGACAAATATAAAGTTGGCAAAGGAGAAGAAAGAAAGTTTAATGGGAAACAAGAGATCACGTGGTGGCTGCTCGAGTTCTTCTGGAGCAAAAGGAATCATAAAGTTGCCAAAAATTGAGATTCATGAAATGGGATCCACTCTACAAGTCAATGTAACATGTGGGGTTGATGACCATTTTATTTTCTGTGAAATTATGAGAATACTGCATGAAGAGAACGTTGAGGTTATCTCTACAAATTCTTCTTTGGCTGGCCATTCACTTCTTCATACCGTACATGCTGAGGTATATTTATACACGTAA 495 0.3697 MDHDQQEYQPSSTRVERKVVEKNRRNQMKILYSKLNSLLPSYNSKEALPLPDQVDEAINYIKRLKTNIKLAKEKKESLMGNKRSRGGCSSSSGAKGIIKLPKIEIHEMGSTLQVNVTCGVDDHFIFCEIMRILHEENVEVISTNSSLAGHSLLHTVHAEVYLYT 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03661 164 FunFam Transcription factor bHLH162 6 90 - -
Mepo6g03661 164 Coils Coil 54 81 - -
Mepo6g03661 164 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 12 159 - -
Mepo6g03661 164 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 64 IPR011598 GO:0046983
Mepo6g03661 164 Gene3D - 3 87 IPR036638 GO:0046983
Mepo6g03661 164 Pfam Helix-loop-helix DNA-binding domain 14 64 IPR011598 GO:0046983
Mepo6g03661 164 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 81 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03661 Mepo-Chr6 48815268 48816731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03661 12 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 43.949 9.80e-35 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g03661 HLH 4.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03661 - - mtr:25487667 234.572