Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03657 ATGGATCATAACCAACAAGGAGGTCAACCTTCTTCTTCAACCAAAGTCGAAAGAAAGATCATTGAGAAAAATAGGAGAAACCAAATGAAGATCCTCTTTTCTAAACTCAACTCTCTTCTCCCTAGCTATAATCCAAAGGAATTAGCGTTACCATTACCTAATCAAGTAGATGAGGCTATAAACCACATAAAGAGCCTAGAGACAAATCTAAAGTTGGCAAAGGAGAAGAAAGAAAGTTTAATGGAAAGGAAGAGACCACGTAGTGGCTGCTCGAGTTCTTCTCAAGTAAAAGAAAGCATAATATCCCCAAAAATCGAGATTCATGAAACGGGACCCATTCTACAAGTGATTGTAGCATGTGGGGTTGATGACCATTTTATTTTCTGTGAAATTATGAGAATACTGCATGAAGAGAACGTTGAGGTTATCTCTTCTAATTCTTCCTTGGCTGGCCATTCATTTCTTCATACCGTGCATGCTCAGATTCCACAAACTTTGTTACAATTTGGAGCAATCAAAATAAGTGAAAGATTGAAAGCATTTGTGAACGGATCTATGAGCGATGTGGAAACAGAGCCTCTATTGTGGGATCTTGAAATTGGAACTGAGAGTTGGGAGCTTCTACATTCTATAATTGTGTATACTAATTGGTTGTCTATATGTTTGAATTTGTTCAATGCGAACAATCAGGAAAACAATGGAGAAGCTGTTGTTGGTTGTAATGCGGGCGACGCTGTGGATAGGGCTGATAATTTGAACATGGTATTAAGCTAA 774 0.3811 MDHNQQGGQPSSSTKVERKIIEKNRRNQMKILFSKLNSLLPSYNPKELALPLPNQVDEAINHIKSLETNLKLAKEKKESLMERKRPRSGCSSSSQVKESIISPKIEIHETGPILQVIVACGVDDHFIFCEIMRILHEENVEVISSNSSLAGHSFLHTVHAQIPQTLLQFGAIKISERLKAFVNGSMSDVETEPLLWDLEIGTESWELLHSIIVYTNWLSICLNLFNANNQENNGEAVVGCNAGDAVDRADNLNMVLS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03657 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 66 IPR011598 GO:0046983
Mepo6g03657 257 FunFam Transcription factor bHLH162 6 92 - -
Mepo6g03657 257 Coils Coil 56 83 - -
Mepo6g03657 257 Gene3D - 5 91 IPR036638 GO:0046983
Mepo6g03657 257 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 182 - -
Mepo6g03657 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 86 IPR036638 GO:0046983
Mepo6g03657 257 MobiDBLite consensus disorder prediction 77 97 - -
Mepo6g03657 257 Pfam Helix-loop-helix DNA-binding domain 15 67 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03657 Mepo-Chr6 48750107 48755554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03657 13 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 39.779 4.06e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g03657 HLH 8.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03657 - - mtr:25487667 328.946