Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03656 ATGGTGATCAATGGTGCACAATCAGGAAACTATCTTGGACTATTTAATAGAACCTCATCAGGTAATGATTATAATCATGTCTTTGCAGTTGAGTTTGATGATTTTAGAAATGAAGAGTTTGATGAAATTAATGATAATCATGTTGGTGTTGATTTGAATTCTATTATTTCTAATTATTCTGAACCTGCTGAGTTTTGGGGTGGTGGAAAAAATGGTGATGAATTGGAAAAGTTGAAATTGTCTAGTGGTGAAAATTATCAAGTTTGGATTGAGTTTAGGGAGTTTGAAATTAATGTTACCATGGCTCCGGCGGGGAAAATAAAACCTAATAGGCCTTTGATTAGTAAGCCTATTAATTTTTCTAGCATTTTTTTGGATGAAATGTATGTTGGATTTTCGGGTTCGACTGGGAGAATGGTTGATACTTGTAGGATTTTGGCTTGGAGTTTTAGTCATTCGAATTTTTCGATTGGTGATGCTTTGAATACTAAAAATTTGCCTATTTATGTGAATCCAAAGAAATTCATATATAAATCTAAGGGTTTTGTTATTAGTGTGATTTTTGGTTCACTTTTAGTCTTTGGTTGTTGCACTTTGGTTTCATTCGTTTTGTTGAGAAAAAAGAACGAAGAGAAAGAGGAAGAATTTGAAGATTGGGAATTGGAGTATTGGCCACATAAGATTAGCTATAAGGATATTTGTGATGCAACAAGTGGATTTTGTGAAGAGAATGTGATAGGGATTGGAACAAGTGGGAAAGTATACAAAGGAGTTTTGAAAGGAGGAGACGGAGTTGCGGTGAAGAGATTCAATCATGATACTCAGCATGGAATGAGAGGCTTTCTGGCAGAGATTTCAAGCTTAGGAAGACTGAAACACAGAAACTTGTTGGGTTTCAAAGGTTGGAGTAGAGGAAAAGGGGGGAAATTGATATTGGTTTATGATTACATGGAGAATGAGAGTTTAGACAAGAGAATCTTTGAGTGTGAAGAGACCAAGTTGCTTAATTGGGAAGAAAGAATAAGAGTCCTAGAAAATGTAGCTAGTGGAATTTTATATCTACATGAAGGTTGGGATTTTGAGGTTTTGCATAGAGATATTAAAGCAAGTAATGTACTACTTGACAAAGATATGAATGCAAGAATAGGTGATTTTGGTCTTGCTAGGTTGCGGCATCAAGAACAAGTAGTAGCTGACACAACAAGTGTGATAGGTACTTTAGGGTACATGGCACCAGAACTAGTTAAAGTCGGTAAACCATCAACTGCAACTGATGTTTATAGTTTCGGAATATTGGTTTTAGAAGTTGTTTGCGGTAGAAGACCTATTGTAATGGATGAACCACCATTGATTGAATTGGTATTTTCTCTTATGGAGAAAGGTGAATTGAGTAGCGCAATTGATGAACGTTTGAAGGGTCAAATGGAGTGTAAATACAGCACTGTGGTAGCCGAGAGATTGCTTCGTTTGGGTTTGTTATGTGCTAGTGTAGACCCTGGCGTTAGACCAACAATGAGACAGGTTGTGAAAATTTTGGAGGGCGTAAAATGCACCGAGTGTAATGAAGAGTGTGTTCATGTGGGTCTTATTGGAAAAATAAACTTAGCAGCATCTTGGTCTAAGGGTTCTTATGATTCGGCACGTTTAAACTCTCCTACCCTTGCTGATATTTTGCCATTCAAATATTTTTCTGGAGATTGTTTAAGTGTATCTTATGCCAGCATGGAGCCATTGTCTGATTCTCTCTCAGAAGGAAGGTGA 1761 0.3674 MVINGAQSGNYLGLFNRTSSGNDYNHVFAVEFDDFRNEEFDEINDNHVGVDLNSIISNYSEPAEFWGGGKNGDELEKLKLSSGENYQVWIEFREFEINVTMAPAGKIKPNRPLISKPINFSSIFLDEMYVGFSGSTGRMVDTCRILAWSFSHSNFSIGDALNTKNLPIYVNPKKFIYKSKGFVISVIFGSLLVFGCCTLVSFVLLRKKNEEKEEEFEDWELEYWPHKISYKDICDATSGFCEENVIGIGTSGKVYKGVLKGGDGVAVKRFNHDTQHGMRGFLAEISSLGRLKHRNLLGFKGWSRGKGGKLILVYDYMENESLDKRIFECEETKLLNWEERIRVLENVASGILYLHEGWDFEVLHRDIKASNVLLDKDMNARIGDFGLARLRHQEQVVADTTSVIGTLGYMAPELVKVGKPSTATDVYSFGILVLEVVCGRRPIVMDEPPLIELVFSLMEKGELSSAIDERLKGQMECKYSTVVAERLLRLGLLCASVDPGVRPTMRQVVKILEGVKCTECNEECVHVGLIGKINLAASWSKGSYDSARLNSPTLADILPFKYFSGDCLSVSYASMEPLSDSLSEGR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03656 586 ProSiteProfiles Protein kinase domain profile. 240 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03656 586 Coils Coil 202 222 - -
Mepo6g03656 586 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 305 IPR013320 -
Mepo6g03656 586 CDD lectin_legume_LecRK_Arcelin_ConA 5 151 IPR001220 GO:0030246
Mepo6g03656 586 Pfam Legume lectin domain 5 154 IPR001220 GO:0030246
Mepo6g03656 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 362 374 IPR008271 GO:0004672|GO:0006468
Mepo6g03656 586 Gene3D - 1 156 - -
Mepo6g03656 586 SUPERFAMILY Protein kinase-like (PK-like) 218 513 IPR011009 -
Mepo6g03656 586 SMART serkin_6 240 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03656 586 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 202 316 - -
Mepo6g03656 586 Gene3D Phosphorylase Kinase; domain 1 200 316 - -
Mepo6g03656 586 Pfam Protein kinase domain 242 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03656 586 Gene3D Transferase(Phosphotransferase) domain 1 317 527 - -
Mepo6g03656 586 ProSitePatterns Protein kinases ATP-binding region signature. 246 268 IPR017441 GO:0005524
Mepo6g03656 586 PANTHER - 10 515 - -
Mepo6g03656 586 FunFam L-type lectin-domain containing receptor kinase S.4 317 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03656 Mepo-Chr6 48735317 48737500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03656 3 464 Receptor kinase-like Gene Family AT4G04960 55.365 3.19e-165 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mepo6g03656 Pkinase 9.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03656 - - vum:124844866 843.958