Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03655 ATGCCTCAACTTAAGCTCCTTATCACTCTTCTTCACACTGTCACCATACTTATATGTTGTGTTTCCACTACTGAGTTTGTCTATAATACAAACTTCAACTCCACAAACATCATCCTATATGGAAATGCAACCACTCAGGCCTCTATTCTCACTCTCACTAATGGTAGTTTCTTCTCCATAGGCCGTGCTTTTTACCCCAAAAAAATACCTATCAAACCACCCAACTCTTCCACCATTCTCCCCTTTGCAACCTCCTTCATTTTCTCTGTTGCCCCCATCAAAAACTCTATTGCCGGACATGCCTTGTCCTTTCTATTCACATCTTCAAGAGATGTAAATGGCACAACATCAGCTGAGTATATGGGACTCTTCAATCTCACCAATGAAGGTAATCCTAACAACCATGTTCTTGCAGTTGAATTCGATATAGCTAAAAACGTAGAAGAGTTCAACGATATAAATGACAATCATGTTGGTGTTGACATAAACTCGCTTACCTCCTTAACTTCACATGAGGCTGGCTACTGGGGTGGAAAAAATGACAATGAATTTAAGGTGTTGAAGATAAAAAGCGGAGAAAATCATCAAGTATGGATTGAGTTTATGAACTCCCAGCTAAACGTTACAATGGCTCTGGCAGGACAAAAGAGGCCTCATGTTCCTCTCATCAGTACAAATGTTAATCTTTCTGGGGTTCTTATGGACGAAACATATGTTGGATTCTGCGCATCCACGGGGCGATTAATAGACAGTGGTAAGATTCTTGCTTGGAGCTTTAGTAACACAAATTTTTCAATTGGTGATGCTTTAGTGACAGATAACTTACCTTCATTTGTCCTTCATAAGGGATGGTTTTCTGGACCAAAAGCTATAGCCGTAGGAGTCACTGTAGTTGTCTGTGTGTTAATCATCGGTTGTGGTTGTGTAGTGTTTTTCATCCTATATATAAGAAAAAAGGGAGAGGAAGAAATTGAAGAGTGGGAACTTGAGTACTGGCCACATAGAATTAGTTTCCAAAAGATTCATGCAGCAACAAAAGGGTTCTCAGAAGAGAATGTGGTTGCTGTAGGAGGGAACGGAAAGGTATATAAAGGGATTTTGCAAGGAGTTGAAGTTGCGGTAAAGAGAATCCCTCAAGAAAGAGAAGATGGAATGAGAGTGTTTGTGGCAGAGGTTTCAAGCCTAGGAAGAATGAAACACAGAAATTTAGTAGGGTTGAGAGGTTGGTGCAAAAAAGATAAAGGAAACTTGATTCTAGTGTATGATTTCATGAATAATGGAAGTTTGGACAAATGGATATTTGAGTGTGAAAAAGGAAAGATGCTAACATGGGAAGAGAGGATTCAAGTTTTGAAAAGCGTGGCCGCGGGGATTCTATACCTTCATGAGGGTTGGGAAGTTAAGGTCTTGCATAGGGATATCAAAGCAAACAATGTTCTACTTGACAAGGACATGAATGCTAGATTGGGGGATTTTGGTTTGGCTCTCAGGCATGAACATCATGGACAAGTTGCCAACACAACAAAAGTATTAGGGACATTAGGATACATTGCTCCGGAAGTGATTCAAACAGGTAGAGCATCGACTATGTCTGATGTGTTCGGCTTTGGAATATTGGTATTGGAAGTAATTTGCGGGCGAAGACCTATTGAAGAACATAAGCCAGGGCTAATTGAATGGGTGGAGTCTCTAATGGTGCTTGATAAATTGCACAATGCTGTTGATGAAAGGTTGGAGACCGAAGGAGGATACTCCATCGAAGAAGCTGTGAGATGGCTTCATTTGGGTTTGTTGTGTACAAGTTCCGACCCTAACGTTAGACCAATGATGAGGCAGGTTGTGAAAATGTTTGGGGGAGAAATGAACAACATTGAGTGTGATGAAGAAAATATAGAGACGAGATTGCTTAGAAGAATACAATCAGCTGCAACATGGTCTAGAACTGATCCATGCAGAGGTCATCCTACTTTTGAAGAAATTAGAATGTTCAGTTATAATTCAAAGACCACAAGTGATATCATTTGGGAAGGTAGATAA 2037 0.4026 MPQLKLLITLLHTVTILICCVSTTEFVYNTNFNSTNIILYGNATTQASILTLTNGSFFSIGRAFYPKKIPIKPPNSSTILPFATSFIFSVAPIKNSIAGHALSFLFTSSRDVNGTTSAEYMGLFNLTNEGNPNNHVLAVEFDIAKNVEEFNDINDNHVGVDINSLTSLTSHEAGYWGGKNDNEFKVLKIKSGENHQVWIEFMNSQLNVTMALAGQKRPHVPLISTNVNLSGVLMDETYVGFCASTGRLIDSGKILAWSFSNTNFSIGDALVTDNLPSFVLHKGWFSGPKAIAVGVTVVVCVLIIGCGCVVFFILYIRKKGEEEIEEWELEYWPHRISFQKIHAATKGFSEENVVAVGGNGKVYKGILQGVEVAVKRIPQEREDGMRVFVAEVSSLGRMKHRNLVGLRGWCKKDKGNLILVYDFMNNGSLDKWIFECEKGKMLTWEERIQVLKSVAAGILYLHEGWEVKVLHRDIKANNVLLDKDMNARLGDFGLALRHEHHGQVANTTKVLGTLGYIAPEVIQTGRASTMSDVFGFGILVLEVICGRRPIEEHKPGLIEWVESLMVLDKLHNAVDERLETEGGYSIEEAVRWLHLGLLCTSSDPNVRPMMRQVVKMFGGEMNNIECDEENIETRLLRRIQSAATWSRTDPCRGHPTFEEIRMFSYNSKTTSDIIWEGR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03655 678 Pfam Legume lectin domain 24 263 IPR001220 GO:0030246
Mepo6g03655 678 Pfam Protein kinase domain 352 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03655 678 Gene3D Transferase(Phosphotransferase) domain 1 424 640 - -
Mepo6g03655 678 SMART serkin_6 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03655 678 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 310 423 - -
Mepo6g03655 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 262 IPR013320 -
Mepo6g03655 678 FunFam L-type lectin-domain containing receptor kinase S.4 22 267 - -
Mepo6g03655 678 FunFam L-type lectin-domain containing receptor kinase S.4 424 630 - -
Mepo6g03655 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Mepo6g03655 678 CDD lectin_legume_LecRK_Arcelin_ConA 24 262 IPR001220 GO:0030246
Mepo6g03655 678 Gene3D - 22 267 - -
Mepo6g03655 678 PANTHER - 43 621 - -
Mepo6g03655 678 CDD STKc_IRAK 357 617 - -
Mepo6g03655 678 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03655 678 Gene3D Phosphorylase Kinase; domain 1 313 423 - -
Mepo6g03655 678 SUPERFAMILY Protein kinase-like (PK-like) 325 616 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03655 Mepo-Chr6 48731399 48733772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03655 21 565 Receptor kinase-like Gene Family AT4G04960 57.581 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mepo6g03655 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03655 - - gmx:100776006 1015.76