Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03654 ATGGGTTGCATAAATTCCAAGACTTCAGCTGTGGATGACAGCAAGGAAGGTTTGACAAAGGATTTGGCATCATCTAGCAAAAGGAATTTTGTGAAGAATGTTTCGAGATCGGATACGAAGAAAAGGGTTGATGGAGTTTTGGAGAAAGATAAGTTATTGGATGGTATTGGCAGTATGAAAGTTTCATTGATTGAGAAGGAATCGGGTAATGGGTCCGTGAGGTTGTATGATGATCATAATGAGAAGAAAACGAGGAAAATGGAGAAACCTGAAATGGCTGTTGTTGTTGATAATCCGAGTCTTGGAGGAAGGGTTCCAAAGACTTTAGAAGGTGAGCAAGTTGCAGCAGGATGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCAACGGGTGGTTGCCGCGGAGTGCAAGTACTTTTGAGAAGTATGATAAAATTGGCCAAGGAACTTACAGCACTGTTTTTAAGGCACGTGATTTGATTAGCCAAAAGGTGGTTGCCTTGAAGCGGGTACGTTTTGATAATCTTGATCATGAGAGTGTCAAGTTCATGGCAAGGGAAATCATTTTTCTGCGTAGGCTTGACCATCCAAATGTAATAAAGTTGGAGGGATTGATAACATCGAAGAATTCTCGCAGCTTGTACCTTGTTTTTGAGTATATGGAACATGATCTTACAGGACTTGTATCAGCACCTGGTATCAAATTTTCTGAACCACAGATTAAATGCTACATGAAGCAGCTTCTTAGTGGATTGGATCATTGCCATAGTCGCGGTATCCTCCACCGTGATATAAAGGGCTCAAATCTTCTCATTGACAATAAGGGCATTTTAAAGATTGCAGATTTTGGTTTGGCAAATTTTTTTGACCCCAATCGAAGTGTTCCATTGACCAGCCGCGTAGTAACTTTATGGTATAGACCACCAGAACTTTTACTTGGATCATCAAATTATGGAGTTGCAGTGGATATGTGGAGCACTGGTTGCATACTCGGTGAACTCTACTGTGGCAGGCCTATATTGCCTGGAAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAACTTTGTGGATCACCATCTGTAGACTATTGGCGTAAACTGCGGCTGCCCCATTCTACAGCTTTCAGGCCTCCACACCATTATAGGAATTGTGTTAAAGATACATTTGAAGAAGTTCCATCTGCTGCTGTGAGGCTTATAGAGACCCTACTCTCTTTAGATCCCACACTTCGAGGAACCGCCGCTACAGCTCTGAAGAACGAGTTCTTTTCGTCGGAACCCGTTGCTTGTGATCCGTCAACTTTGCCAAAATATCCTCCCACCAAAGAGATTGACGCTAAAATGCGGGAAGAATCGACAAGAAAGGAAGGAGCTCTTGGGGGAAAGGAACAAAAAGTTGGGTCACGAGTAAGACAAGAGAAAGAACCTCAGTCATTTGTCTTACCCAAAGCCAATGCTGTATCTCACATATCAATGCAGCAAGGGCAGCGCTTTCCAAACATGACAAGCCGGAATGAATCATTCAACCCTCACAGAGAGCCTGTATCTGGATTTATGGTTTTGCCACACAAACAGTCGGAAGATGTTAAAGAAACGGCTAATTATTTCTCTGGGCCTCTTTATCCGAGGTCTTCACATTCAGGTTTACTGGTTCCAGGTTCGGGCCGGCACAAAATTGGAAAAGAAGCCAGTGAGCGGCCGCTTCCTGTTTCAACTAAAGCCAACCTATCGAAACCATCTAGGACTTCATTCTCTGGAAACCAAAAAGAAAATCCAGCTCCTTGGAGGCCCCAAGACACAATTCAAGTACAAAAGTCTTTTGGGTTGAGTAATGGATCAGAGTCAAGAAAGCGGCATGACAAAAAACGCCATTCAAAGATAGTCGATCTCAGCCAAACAGAAAATGGAAAGGATGGGAATGTATCCAGTGGAAACAATCTATATATGTCTGGTCCATTACTGGTTTCATCAAACAATATGGATCAGATGCTCAAAGAGCGCGATAGGAAGTTGCAAGAATATTCAAGACGAGCCAGAATTAAATAG 2052 0.4269 MGCINSKTSAVDDSKEGLTKDLASSSKRNFVKNVSRSDTKKRVDGVLEKDKLLDGIGSMKVSLIEKESGNGSVRLYDDHNEKKTRKMEKPEMAVVVDNPSLGGRVPKTLEGEQVAAGWPTWLSSVAGEAINGWLPRSASTFEKYDKIGQGTYSTVFKARDLISQKVVALKRVRFDNLDHESVKFMAREIIFLRRLDHPNVIKLEGLITSKNSRSLYLVFEYMEHDLTGLVSAPGIKFSEPQIKCYMKQLLSGLDHCHSRGILHRDIKGSNLLIDNKGILKIADFGLANFFDPNRSVPLTSRVVTLWYRPPELLLGSSNYGVAVDMWSTGCILGELYCGRPILPGKTEVEQLHRIFKLCGSPSVDYWRKLRLPHSTAFRPPHHYRNCVKDTFEEVPSAAVRLIETLLSLDPTLRGTAATALKNEFFSSEPVACDPSTLPKYPPTKEIDAKMREESTRKEGALGGKEQKVGSRVRQEKEPQSFVLPKANAVSHISMQQGQRFPNMTSRNESFNPHREPVSGFMVLPHKQSEDVKETANYFSGPLYPRSSHSGLLVPGSGRHKIGKEASERPLPVSTKANLSKPSRTSFSGNQKENPAPWRPQDTIQVQKSFGLSNGSESRKRHDKKRHSKIVDLSQTENGKDGNVSSGNNLYMSGPLLVSSNNMDQMLKERDRKLQEYSRRARIK 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03654 683 MobiDBLite consensus disorder prediction 572 613 - -
Mepo6g03654 683 FunFam probable serine/threonine-protein kinase At1g54610 224 465 - -
Mepo6g03654 683 MobiDBLite consensus disorder prediction 451 474 - -
Mepo6g03654 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Mepo6g03654 683 ProSitePatterns Protein kinases ATP-binding region signature. 147 170 IPR017441 GO:0005524
Mepo6g03654 683 FunFam probable serine/threonine-protein kinase At1g54610 128 223 - -
Mepo6g03654 683 SMART serkin_6 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03654 683 CDD STKc_CDK9_like 141 425 - -
Mepo6g03654 683 ProSiteProfiles Protein kinase domain profile. 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03654 683 MobiDBLite consensus disorder prediction 1 39 - -
Mepo6g03654 683 Gene3D Phosphorylase Kinase; domain 1 128 223 - -
Mepo6g03654 683 Gene3D Transferase(Phosphotransferase) domain 1 224 462 - -
Mepo6g03654 683 PANTHER CELL DIVISION PROTEIN KINASE 139 429 - -
Mepo6g03654 683 SUPERFAMILY Protein kinase-like (PK-like) 136 431 IPR011009 -
Mepo6g03654 683 MobiDBLite consensus disorder prediction 541 648 - -
Mepo6g03654 683 MobiDBLite consensus disorder prediction 634 648 - -
Mepo6g03654 683 Pfam Protein kinase domain 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03654 683 MobiDBLite consensus disorder prediction 451 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03654 Mepo-Chr6 48726025 48730519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03654 133 457 Core Cell Cycle Gene Families AT5G10270 47.507 2.04e-106 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo6g03654 Pkinase 2.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03654 - K08819 gmx:100775462 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03654 6 48726025 48730519 Mepo2g02718 2 36943729 36948424 PCT