Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03637 ATGGAAGGAGCTTGTGGTTATGGAGACATACACAAGGTTGATTATGGGAAATATAGTACTGGATTAAGCACCATTTTGTTCAATAAAGGGAGTACTTGTGGGGCTTGCTATGAAATTAGATGTGTTGATCACATCTTATGGTGCTTGATTGGAAGTCCTTCTGTAGTTGTTACTGTTACAGATTTCTGTGCTCCAAATTATGGTCTTTCATCTGATTATGGTGGATGGTGCAATTTTCCAACTGAACATTTTGAGATGTCAGAAGCTGCATTTGCTGAAATTGCTAAGAGAAAATCTGATATAGTTCCAATTCAATATAGAAGGGTTAAATGCAAAAGAACTGGTGGCTTGAAATACACAATGAGTGGAAGTGATCATTTCTATCAAGTTCTTATTACAAATGTAGGGTTGGATGGTGAAGTGGTTGCTGTGAAAGTGAAGGGAATTAAAACTGGATGGATACCAATGGCAAGGAATTGGGGACAAAACTGGCATTGCAATGTGAACCTTCAAAAACAGCCTCTATCCTTTGAGGTCAATATCGCAAGTGGAAAAACAATCACATCCTACAATGTAGCTCCTGCAAACTGGCAATTTGGACAAACATTTGAAGGAAAACAATTCTAG 627 0.3796 MEGACGYGDIHKVDYGKYSTGLSTILFNKGSTCGACYEIRCVDHILWCLIGSPSVVVTVTDFCAPNYGLSSDYGGWCNFPTEHFEMSEAAFAEIAKRKSDIVPIQYRRVKCKRTGGLKYTMSGSDHFYQVLITNVGLDGEVVAVKVKGIKTGWIPMARNWGQNWHCNVNLQKQPLSFEVNIASGKTITSYNVAPANWQFGQTFEGKQF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03637 208 PRINTS Expansin signature 127 148 IPR002963 GO:0009664
Mepo6g03637 208 PRINTS Expansin signature 55 65 IPR002963 GO:0009664
Mepo6g03637 208 PRINTS Expansin signature 91 104 IPR002963 GO:0009664
Mepo6g03637 208 PRINTS Expansin signature 74 91 IPR002963 GO:0009664
Mepo6g03637 208 PRINTS Expansin signature 115 127 IPR002963 GO:0009664
Mepo6g03637 208 PRINTS Expansin signature 41 52 IPR002963 GO:0009664
Mepo6g03637 208 PRINTS Expansin signature 162 183 IPR002963 GO:0009664
Mepo6g03637 208 PRINTS Expansin signature 191 207 IPR002963 GO:0009664
Mepo6g03637 208 PRINTS Expansin signature 14 28 IPR002963 GO:0009664
Mepo6g03637 208 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Mepo6g03637 208 PRINTS Expansin/Lol pI family signature 99 115 IPR007118 GO:0005576
Mepo6g03637 208 PRINTS Expansin/Lol pI family signature 153 167 IPR007118 GO:0005576
Mepo6g03637 208 PRINTS Expansin/Lol pI family signature 23 41 IPR007118 GO:0005576
Mepo6g03637 208 PRINTS Expansin/Lol pI family signature 1 19 IPR007118 GO:0005576
Mepo6g03637 208 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 126 205 IPR007117 -
Mepo6g03637 208 Pfam Lytic transglycolase 21 106 IPR009009 -
Mepo6g03637 208 Gene3D - 1 112 IPR036908 -
Mepo6g03637 208 SMART dpbb_1 19 106 IPR007112 -
Mepo6g03637 208 Pfam Expansin C-terminal domain 120 194 IPR007117 -
Mepo6g03637 208 CDD DPBB_EXPA_N 1 111 - -
Mepo6g03637 208 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 2 116 IPR007112 -
Mepo6g03637 208 PANTHER EXPANSIN-A15 1 208 IPR002963 GO:0009664
Mepo6g03637 208 Gene3D - 117 208 IPR036749 -
Mepo6g03637 208 SUPERFAMILY Barwin-like endoglucanases 1 134 IPR036908 -
Mepo6g03637 208 SUPERFAMILY PHL pollen allergen 113 205 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03637 Mepo-Chr6 48520562 48522710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03637 3 208 Expansin Gene Family AT4G38210 67.961 7.48e-110 313