LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g03636	ATGCCTCAACTTAAGCTTTTTATCACTTTTCTTCACACTGTAACCATAATTATATGTTGTGTTTCCACTACTGAGTTTATCTATAATACAAACTTCAACTCCACAAACATCATCCTATATGGAAATGCAACCATTCAGGCCTCTATTCTCACTCTCACTAATGGTAGTTTCTTCTCCACAGGCCGTGCTTTTTACCCTAAAAAAATACCTATTAAACCACCCAACTCTTCCACCATTCTCCCCTTTGCAACCTCCTTCATTTTCTCTGTTGCCCCCATCAAAAACTCTTTTGAAGGACATGCCTTGTCCTTCTTATTTACATCTTCAAGAGGTGTAAATGGCACAACTTCAGCTGAGTATATGGGCCTCTTCAATCTCACCAATGAAGGTAATCCTAACAACCATGCTCTTGCAGTTGAGTTTGATATTGTTAGAAATGAAGAAGAGTTCAACGATATAAATGACAATCATGTTGGTGTTGACATAAACTCGCTTACATCCTTAACTTCACATGAGGCTGGCTACTGGGGTGGAAAAAATGACAATGAATTTAAGGTGTTGAAGATAAAAAGCGGAGAAAATTATCAAGTATGGATCGAGTTTATGCACTCCCAGCTAAACATTACAATGGCTCTGGCAGGACAAAAGAGGCCTCATGTTCCTCTCATCAGTACGAATGTTAATCTTTCTGGGGTTCTTATGGACGAAACATATGTTGGATTCTGCGCATCCACGGGGCGATTAATAGACAGTGGTAAGATTCTTGCTTGGAGCTTTAGTAACACAAATTTTTCAATTGGTAATGCTTTAGTGACAGATAACTTACCTTCATTTTTCCCTCGTAAGGGATGGTTTTCTGGAGCAAAAGCTATAGTTGTAGGAGCCATCAGTGTTGTTTGTGTATTAATCATCAGTTGCAGTTGTGCATTGTTTTTTATCCTCTATAGGGGAAACATTGTAGAGGAAGAAATTGAAGATTGGGAACTAGAGTATTGGCCACATAAGATTAGTTACCAAGAGATTCATGAAGCAACAGGAGGGTTCTCTGAAGAGAATGTGGTTGCTGTAGGAGGAAACAAGAGTGTATATAAAGGGATCTTGCAAGGGGTTGAAGTCGCGGTCAAAAGAATCCCTCAAGAAAGAGAAGGGATGAGAGAGTTTTTGGCCGAGGTTTCAAGCCTAGGAAGACTGAAACATAGAAATTTAGTAGGATTCCGAGGTTGGTGCAAGAAAGAAAAGGGAAACTTGATTCTAGTTTATGACTTCATGAATAATGGAAGTTTAGACAAATGGATCTTTGAGTGTGAAGAAGGAAAGATGCTAACATGGGAAAAGAGGATTCAAGTTTTGAAAAATGTAGCCACAGGAATTCTATACCTGCATGAAGGTTGGGAAGTTAAGGTTTTGCATAGGGACATCAAAGCAAGCAATGTTCTACTTGACAAGTACATGAATGCTAGATTGGGTGATTTTGGTTTGGCTCTCATGCATGAGCATCATGGACAAGTTGCCAACACAACAAAAGTATTGGGGACATTAGGATACATTGCTCCGGAAGTGATTCGAACAGGAAGAGCGTCCACACTGTCTGATGTGTTTGGGTTTGGAATATTGGTTTTAGAAGTGATTTGCGGGAGAAGACCTATTGAAGAACATAAGCCAGGGCTAATTGAATGGGTGGAGTCCCTAATGGTGCTTGATCAACTTCACAGTGCTGTTGATGAAAGGTTGAAGGCTAAGGGAGGATACGCCATCGAGGAAGCTGAGAGATTGCTTCATTTGGGTTTGCTGTGTTCAAATTCAGACCCTGGTGTTAGACCAATAATGAGACAGGTTGTGAAAATGTTAGAGGGAGAAATAGAAAGCATTGAATCTGATGAAGAAAATATGGAGAAAAGTTTACTTGGAAGAATAAAATCAGCTGCAATGTGGTCCAGAACTGAAAGTACACTTCCATATAGAGATCACCCTACTTTTGAAGAAATTAGAATGATCAGTTATAATTCTAAGACGTCTACAAGTGGCTCAAGTTCCATTTTGCGGTCGGATTCAGATATCATTCGGGAAGGCCGCTAA	2076	0.3979	MPQLKLFITFLHTVTIIICCVSTTEFIYNTNFNSTNIILYGNATIQASILTLTNGSFFSTGRAFYPKKIPIKPPNSSTILPFATSFIFSVAPIKNSFEGHALSFLFTSSRGVNGTTSAEYMGLFNLTNEGNPNNHALAVEFDIVRNEEEFNDINDNHVGVDINSLTSLTSHEAGYWGGKNDNEFKVLKIKSGENYQVWIEFMHSQLNITMALAGQKRPHVPLISTNVNLSGVLMDETYVGFCASTGRLIDSGKILAWSFSNTNFSIGNALVTDNLPSFFPRKGWFSGAKAIVVGAISVVCVLIISCSCALFFILYRGNIVEEEIEDWELEYWPHKISYQEIHEATGGFSEENVVAVGGNKSVYKGILQGVEVAVKRIPQEREGMREFLAEVSSLGRLKHRNLVGFRGWCKKEKGNLILVYDFMNNGSLDKWIFECEEGKMLTWEKRIQVLKNVATGILYLHEGWEVKVLHRDIKASNVLLDKYMNARLGDFGLALMHEHHGQVANTTKVLGTLGYIAPEVIRTGRASTLSDVFGFGILVLEVICGRRPIEEHKPGLIEWVESLMVLDQLHSAVDERLKAKGGYAIEEAERLLHLGLLCSNSDPGVRPIMRQVVKMLEGEIESIESDEENMEKSLLGRIKSAAMWSRTESTLPYRDHPTFEEIRMISYNSKTSTSGSSSILRSDSDIIREGR	691

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g03636	691	CDD	STKc_IRAK	357	618	-	-
	Mepo6g03636	691	FunFam	L-type lectin-domain containing receptor kinase S.4	22	267	-	-
	Mepo6g03636	691	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	468	480	IPR008271	GO:0004672\|GO:0006468
	Mepo6g03636	691	SUPERFAMILY	Concanavalin A-like lectins/glucanases	22	263	IPR013320	-
	Mepo6g03636	691	Pfam	Legume lectin domain	24	263	IPR001220	GO:0030246
	Mepo6g03636	691	PANTHER	-	42	620	-	-
	Mepo6g03636	691	FunFam	L-type lectin-domain containing receptor kinase S.4	423	629	-	-
	Mepo6g03636	691	Coils	Coil	613	633	-	-
	Mepo6g03636	691	Gene3D	-	22	268	-	-
	Mepo6g03636	691	SUPERFAMILY	Protein kinase-like (PK-like)	326	617	IPR011009	-
	Mepo6g03636	691	MobiDBLite	consensus disorder prediction	670	691	-	-
	Mepo6g03636	691	CDD	lectin_legume_LecRK_Arcelin_ConA	24	262	IPR001220	GO:0030246
	Mepo6g03636	691	SMART	serkin_6	348	614	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g03636	691	Pfam	Protein kinase domain	354	614	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g03636	691	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	313	422	-	-
	Mepo6g03636	691	Gene3D	Transferase(Phosphotransferase) domain 1	423	641	-	-
	Mepo6g03636	691	ProSiteProfiles	Protein kinase domain profile.	348	620	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g03636	691	Gene3D	Phosphorylase Kinase; domain 1	318	422	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g03636	Mepo-Chr6	48518182	48520498	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g03636	21	564	Receptor kinase-like Gene Family	AT4G04960	56.962	0.0	601

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mepo6g03636		Pkinase	1.1e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g03636	-		-	gmx:100776006	1033.86