LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g03634	ATGCCTCAACTTAAGCTACTTTTCATTCTTCTTCACACTTTAACCATTTTAAGTTATGTTTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCCAAAAACATTATCCTATATGGAAATGCAACCATTAACAAATCCATTCTCACTCTCACTAATGACACTTCCACTTCCTTCTCAATAGCTCGTGCTTTTTACCCTAAAAAAATACCTACAAAACCACCAAACTCTTCCACTCTTCTCCCATTTGCTACTTCCTTCATTTTCTCCGTCTCCCCCATCAAAAACTTTATCACAGGACATGGCTTTGCCTTCGTATTCACACCTTCAAGTGGTCTAAATGGAACAACATCAACCGAGTATATCGGTCTTTTAAATCTCACAAATCAAGGTAATCCTAACAACCATGTTTTTGGAGTCGAATTCGATATAGTTAGAAACGAAGAATTCAACGATACAAATGATAATCATGTTGGTATCGACGTAAACTCTCTTAAATCCTTAACTTCACATGAGGCTGGCTATTGGGGTGGGAAACATAACAAGAAGTTTAATGCGTTGGACATGAAAAATGGAGAAAATTATCAAGTATGGATTGAATTTATGCACTCTCAGATAAACGTTACGATGGCTCGGGCAGGACGAAAGAGGCCACATATGCCTCTTATCAGCATGAATCTTAACCTTTCTGGAGTTCTTATGGATGAAACTTATGTTGGATTTTGTGCAGCCACGGGGAAGAAAAGAGATAGTGTTAAGATTCTTGCTTGGAGCTTTAGTAATACAAATTTTTCAATTGGTGATGCTTTAGTAACACACAGCTTGCCTTCATTTGTCCCTCTTAAAGGATGGTTTTTCAGAGCAAAGGCCATACATGTAGGAATAACGAGTGTTGTCTGTGTCTTAATCATTGGTTGTGCAGTGTTATTCATTCTCTATATGAGAAACAAAGGAGAAGAAGAAATTGAAGATTGGGAACTAGAGTATTGGCCACATAGGATTAGTTTCCAAGAGATTCATGAAGCAACAGGAGGATTCTCTGAAGAGAATGTGGTTGCTATACAAGGGAACAAAAGTGTATACAAAGGGATTTTGCAAGGCGTTGAAGTCGCGGTCAAGAGAATCCCTCAAGAGAGAGAAGGGATGAGAGAGTTTTTGGCCGAGGTTTCAAGCCTAGGAAGGCTGAAACATAGAAATTTAGTTGGATTCAGAGGTTGGTGCAAGGAAGAAAAGGGAAACTTGATTCTAGTTTATGACTTCATGAAGAATGGAAGTTTAGACAAATGGATCTTTGAGTGTGAAGAAGGAAAGATGCTAACATGGGAAGAGAGGATTCAAGTTTTGAAAAATGTAGCCACGGGGATTCTTTACCTGCATGAAGGTTGGGAAGTTAAGGTCTTGCATAGGGATATCAAAGCAAGCAATGTTCTACTTGACAAGTACATGAATGCTAGATTGGGTGATTTTGGTTTGGCTCTCATGCATGAGCATCATGGACAAGTGGCCAGCACAACAAAAGTACTTGGAACATTAGGATACATTGCTCCGGAAGTGATTCGTACAGGAAGAGCATCAACTATGTCTGATGTGTTTGGGTTTGGAATATTGGTGTTGGAAGTGATTTGCGGCCGAAGACCTATTGAAGAACATAAGCCAGGGTTAATTGAATGGGTGGAGTCCCTAATGGTGCTTGATCAATTGCACAATGCTGTTGATGAAAGGTTGAAGGCTAAAGGAGGATGCACCATTAAGGAAGCTGAGAGATCGCTTCATTTGGGTTTGCTGTGTTCAAATTCAGACCCTAGTGTTAGACCAATAATGAGACAGGTTGTGAAAATGTTAGAGGGAGAAATAGAAAGCATTGAATCTGATGAAGAAAATATGGAGAAAAGTTTACTTGGAAGAATAAAATCAGCTGCAATGTGGTCTAGAACTGAAAGTACACTTCCATATAGAGATCACCCTACTTTTGAAGAAATTAGAATGATCAGTTATAATTCTAAGGCGTCTACAAGAGGCTCAAGTTCCATTCCGCCATCAGATTCAGATATCATCAAGGAAGGCCGATAA	2070	0.3903	MPQLKLLFILLHTLTILSYVSTTEFVYNTNFNSKNIILYGNATINKSILTLTNDTSTSFSIARAFYPKKIPTKPPNSSTLLPFATSFIFSVSPIKNFITGHGFAFVFTPSSGLNGTTSTEYIGLLNLTNQGNPNNHVFGVEFDIVRNEEFNDTNDNHVGIDVNSLKSLTSHEAGYWGGKHNKKFNALDMKNGENYQVWIEFMHSQINVTMARAGRKRPHMPLISMNLNLSGVLMDETYVGFCAATGKKRDSVKILAWSFSNTNFSIGDALVTHSLPSFVPLKGWFFRAKAIHVGITSVVCVLIIGCAVLFILYMRNKGEEEIEDWELEYWPHRISFQEIHEATGGFSEENVVAIQGNKSVYKGILQGVEVAVKRIPQEREGMREFLAEVSSLGRLKHRNLVGFRGWCKEEKGNLILVYDFMKNGSLDKWIFECEEGKMLTWEERIQVLKNVATGILYLHEGWEVKVLHRDIKASNVLLDKYMNARLGDFGLALMHEHHGQVASTTKVLGTLGYIAPEVIRTGRASTMSDVFGFGILVLEVICGRRPIEEHKPGLIEWVESLMVLDQLHNAVDERLKAKGGCTIKEAERSLHLGLLCSNSDPSVRPIMRQVVKMLEGEIESIESDEENMEKSLLGRIKSAAMWSRTESTLPYRDHPTFEEIRMISYNSKASTRGSSSIPPSDSDIIKEGR	689

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g03634	689	SMART	serkin_6	346	612	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g03634	689	SUPERFAMILY	Protein kinase-like (PK-like)	322	615	IPR011009	-
	Mepo6g03634	689	Gene3D	Phosphorylase Kinase; domain 1	311	420	-	-
	Mepo6g03634	689	Gene3D	Transferase(Phosphotransferase) domain 1	421	639	-	-
	Mepo6g03634	689	Pfam	Protein kinase domain	359	612	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g03634	689	FunFam	L-type lectin-domain containing receptor kinase S.4	421	627	-	-
	Mepo6g03634	689	CDD	lectin_legume_LecRK_Arcelin_ConA	23	262	IPR001220	GO:0030246
	Mepo6g03634	689	MobiDBLite	consensus disorder prediction	668	689	-	-
	Mepo6g03634	689	SUPERFAMILY	Concanavalin A-like lectins/glucanases	23	262	IPR013320	-
	Mepo6g03634	689	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	466	478	IPR008271	GO:0004672\|GO:0006468
	Mepo6g03634	689	ProSiteProfiles	Protein kinase domain profile.	346	618	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g03634	689	Coils	Coil	611	631	-	-
	Mepo6g03634	689	CDD	STKc_IRAK	356	616	-	-
	Mepo6g03634	689	Pfam	Legume lectin domain	23	263	IPR001220	GO:0030246
	Mepo6g03634	689	PANTHER	-	41	618	-	-
	Mepo6g03634	689	Gene3D	-	21	267	-	-
	Mepo6g03634	689	FunFam	L-type lectin-domain containing receptor kinase S.4	21	267	-	-
	Mepo6g03634	689	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	308	420	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g03634	Mepo-Chr6	48507159	48509385	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g03634	20	562	Receptor kinase-like Gene Family	AT4G04960	56.429	0.0	594

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mepo6g03634		Pkinase	1.4e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g03634	-		-	gmx:100776006	1033.09