Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03631 ATGGCTGCAGCTAAGAACAGTGGTAAATTCAACAAAGATTTTGGTGATGAAACTCATAACAATCACAACAAGGTTACAAAGATTGGTGAAAGCCAAGTTAATTGGGAGATTGAAAAAGGAAAAAGTGTTGAATTAAGCTCTTCTCAAAGACATCATTGGAAGCCAGTTTTTGATGAAGCTTCTAACATGTCACATAATAGACCTTTCAAGAAAAGCAAAAGTCCTCAACGTGAAAATCAAAACCAAAATCAATTTCAACCTTTCTCTTTTCCTTCTTCAGCTTCTTCTTCTTCAAGGCATGTTTTTCCTTTTGCTTTTGATCATAATTCACAACAATTTCCTCAACAATTTGGTTCCAACAACAATTTACCTTTTCATCCTCAACAACCTCTTCAATCAACACAAAACCAACAACAACAAATGATATCTTTTGGGTCACAGTCACAACAACAGACCAATATTGTTCCATATCCACCAATGTTGTCTCAACAGCAACATCAACAACAGATTCTTCAATATTGGAGTGATGCATTGAATCTTAGTCCAAGAGGAAGAATGTTAATGATGATGAACAACAACAACAATAGGTATTTGGGGCAATATGGTAATAATAATAATGGACCAATGTTTAGGCCTCAAATTCAACCTATAAACACTACAAAACTCTACAGAGGAGTTAGACAAAGACATTGGGGAAAATGGGTTGCTGAAATTCGTCTACCTCGAAACAGAACTCGTCTTTGGTTAGGAACATTTGATACTGCAGAAGATGCTGCTTTAGCTTATGATCGCGAGGCGTTTAAGTTAAGAGGTGAGAATGCAAGGCTCAATTTTCCTGATCTTTTTCTCAACAAAGGAAAAGATAAAGAAAATGAAAATGAAAAAGAAGAAGAACCTTCATCACCGCCTCCAACAGAAACAACAATTTCAACTGTTACTTCTCCTTCAAGTAACACCGCGACAAAGCAGCCTGAACCTCCTCCGATGCAGACACTTCCAATGGAAGAGTCTAATGAGAATGACTCGGGAATTGGATCAAGTGACGCGACAGTGAGTGAAGGCGGAGAAGGAGTTTCAGTTTCGCAGTCTCAAGAATTGGTTTGGAGTGAAATGTCAGCATGGTTTAATGCTATTCCAGCTGCTTGGGGACCAGGTAGTCCTGTTTGGGATGATAATCTATTTTCGCAGTTGCAAAATCCTTTTTCCAATCTCAATCAACAATCAGAATTCAACGATTTCGATTCTCAGACGGAGTCAGGTTCTTCCATTAGGCCTTTCTTCTGGAATAATGATCAAAATTAA 1302 0.3786 MAAAKNSGKFNKDFGDETHNNHNKVTKIGESQVNWEIEKGKSVELSSSQRHHWKPVFDEASNMSHNRPFKKSKSPQRENQNQNQFQPFSFPSSASSSSRHVFPFAFDHNSQQFPQQFGSNNNLPFHPQQPLQSTQNQQQQMISFGSQSQQQTNIVPYPPMLSQQQHQQQILQYWSDALNLSPRGRMLMMMNNNNNRYLGQYGNNNNGPMFRPQIQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPDLFLNKGKDKENENEKEEEPSSPPPTETTISTVTSPSSNTATKQPEPPPMQTLPMEESNENDSGIGSSDATVSEGGEGVSVSQSQELVWSEMSAWFNAIPAAWGPGSPVWDDNLFSQLQNPFSNLNQQSEFNDFDSQTESGSSIRPFFWNNDQN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03631 433 MobiDBLite consensus disorder prediction 333 363 - -
Mepo6g03631 433 SUPERFAMILY DNA-binding domain 222 280 IPR016177 GO:0003677
Mepo6g03631 433 MobiDBLite consensus disorder prediction 281 363 - -
Mepo6g03631 433 Gene3D AP2/ERF domain 222 280 IPR036955 GO:0003700|GO:0006355
Mepo6g03631 433 SMART rav1_2 222 285 IPR001471 GO:0003700|GO:0006355
Mepo6g03631 433 MobiDBLite consensus disorder prediction 302 325 - -
Mepo6g03631 433 MobiDBLite consensus disorder prediction 282 301 - -
Mepo6g03631 433 MobiDBLite consensus disorder prediction 1 34 - -
Mepo6g03631 433 MobiDBLite consensus disorder prediction 10 24 - -
Mepo6g03631 433 FunFam Ethylene-responsive transcription factor 2 221 280 - -
Mepo6g03631 433 PRINTS Ethylene responsive element binding protein signature 245 261 IPR001471 GO:0003700|GO:0006355
Mepo6g03631 433 PRINTS Ethylene responsive element binding protein signature 223 234 IPR001471 GO:0003700|GO:0006355
Mepo6g03631 433 Pfam AP2 domain 223 271 IPR001471 GO:0003700|GO:0006355
Mepo6g03631 433 MobiDBLite consensus disorder prediction 57 94 - -
Mepo6g03631 433 MobiDBLite consensus disorder prediction 75 94 - -
Mepo6g03631 433 ProSiteProfiles AP2/ERF domain profile. 222 279 IPR001471 GO:0003700|GO:0006355
Mepo6g03631 433 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 27 391 - -
Mepo6g03631 433 CDD AP2 221 281 IPR001471 GO:0003700|GO:0006355
Mepo6g03631 433 MobiDBLite consensus disorder prediction 111 149 - -
Mepo6g03631 433 MobiDBLite consensus disorder prediction 405 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03631 Mepo-Chr6 48489416 48491506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03631 1 394 AP2-EREBP Transcription Factor Family AT2G20880 38.821 4.17e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo6g03631 AP2 3.1e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03631 6 48489416 48491506 Mepo6g03631 6 48489416 48491506 ECH