Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03614 ATGGTAGTAATCGAAGATCGAAAGGATATTCCCTCCACCGCAGCTTCAACCAACGACGTTTCCGACGGCTTTGAAACCGCCAGTGACACCGATCTCGGCAGCGACGTCGACGCCAATGACGGCGGCGGTGCAATCAAACACGAGGAAGAAGATCATCGTGATCAGCAAAGCCACCAACAGACAGAGCAAGGGAAGGAAAAGGAACAGGAGCAGAATGATCCTCAGAGAATCATTTCCTCTGATAATGCTTCGATTGACGAGGAGGAACTGAAACAGAAAGCATTGGTTCAAGCAAATGAAGCAAAGGTAGAAGGGAACAAACTTTTTGTAGATGCAAAGTATGAGGAGGCATTAACACAATATGAACTTGCTTTAGAAGTTGCGCCAGACATGCCTTCGTCTGTAGAAATACGCTCAATATGCCATGCAAACCGTGGAGTGTGCTTTCTGAAAATGGGAAAATATGAAAACACAGTTAAAGAATGCACCAAAGCGTTAGAATTGAATCCTATGTATGTCAAAGCTTTGGTAAGAAGAGGAGAGGCCCATGAAAAGCTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTGGGAAAGCTATTCGTCGGTTAGAGCCTCTTGCTGCGGTAAAACGGGAAAAGATGAAGGAAGAAATGATTGCAAAACTGAAAGATATGGGCAACTCTCTATTGGGCCGCTTTGGGATGAGTGTAGACAACTTTAAAGCAGTCCAAGATCCAAACACTGGTTCCTATTCTGTCTCATTCCAACAGTAA 813 0.4391 MVVIEDRKDIPSTAASTNDVSDGFETASDTDLGSDVDANDGGGAIKHEEEDHRDQQSHQQTEQGKEKEQEQNDPQRIISSDNASIDEEELKQKALVQANEAKVEGNKLFVDAKYEEALTQYELALEVAPDMPSSVEIRSICHANRGVCFLKMGKYENTVKECTKALELNPMYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQAGKAIRRLEPLAAVKREKMKEEMIAKLKDMGNSLLGRFGMSVDNFKAVQDPNTGSYSVSFQQ 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03614 270 ProSiteProfiles TPR repeat profile. 139 172 IPR019734 GO:0005515
Mepo6g03614 270 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 47 270 - -
Mepo6g03614 270 MobiDBLite consensus disorder prediction 1 84 - -
Mepo6g03614 270 Pfam Tetratricopeptide repeat 141 171 IPR001440 GO:0005515
Mepo6g03614 270 SUPERFAMILY TPR-like 98 212 IPR011990 GO:0005515
Mepo6g03614 270 Pfam Tetratricopeptide repeat 174 206 IPR013105 -
Mepo6g03614 270 Gene3D Tetratricopeptide repeat domain 44 237 IPR011990 GO:0005515
Mepo6g03614 270 ProSiteProfiles TPR repeat profile. 173 206 IPR019734 GO:0005515
Mepo6g03614 270 MobiDBLite consensus disorder prediction 11 28 - -
Mepo6g03614 270 SMART tpr_5 173 206 IPR019734 GO:0005515
Mepo6g03614 270 SMART tpr_5 98 131 IPR019734 GO:0005515
Mepo6g03614 270 SMART tpr_5 139 172 IPR019734 GO:0005515
Mepo6g03614 270 MobiDBLite consensus disorder prediction 41 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03614 Mepo-Chr6 48314625 48319663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03614 98 240 Calmodulin-binding Proteins AT3G25230 37.086 1.16e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03614 K24926 - gmx:100808386 375.17