Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03613 ATGTTAGAGATGAGATCTAGTTCACTGTACAAGAGAATGAAATTGAAAATTCATATACAAGTGATATTTGGATTGATGTTGATCTTTATAGTTCAGTTTTCACTTGCAGCTACTAATCCCACTGATGTTGCTGCAATTAATAGATTATATGCTGCATTGGGCAACCCAGTTCTTCCTGGGTGGGTTGCTAGTGCGGGAGACCCGTGCGGAGAAGCGTGGCAAGGCGTTCAATGTAATGATTCACTCATACAAGAAATAACTCTGATTGGTGCAAATTTGGGAGGAGTATTGGGTGATAGCTTGGGGCCGTTTGTTTCTATCAAATCAATATCTCTAAGCAACAACCACATTGGAGGAAGTATTCCATCAAGTTTACCTGTCACATTGCAATCCCTTTTTCTTTCAGGTAACCAGCTCACTGGAAGTATTCCAGTCTCTTTATCAACATTGACAGAACTGACTGCCATGTCTCTTGATAATAACCTGTTAACCGGAGAAATACCAGATGTCTTTCAGTCTCTAACGCGATTGACCAATCTAGATTTATCTCATAACAATTTGAGTGGGGAATTGCCTCCATCTGTAGAGAATTTATCAGCTGTGACCACCTTAAATTTACAGAACAATAACCTGTCTGGGACACTCGATGTTTTGCAAGACCTTCCACTGACAGATTTGAATGTTGAGAACAACCAGTTTTCTGGACCAATACCTCAAAAGTTGTTAACCATTACCAACTTCAGAAAAGATGGAAACCAATTTGACCTCAATAGTAATGTTACTATAGCACCAGCTCGCCAACCTCATTCTCCGGTAACAGCATCTCCGGTAACAACATCACCATCAGGAACTGTAGTTTCTGGGACACCATCTTCTGGACGTGTACCTACTAAACAGGCTGGTGGACCAACTGCATCAAAGGATTCAAGTTCCGGGAAATCGAAAAAAAATACCAAAAGAGTGGTTTGGATAACTATTTCTGGTGTATTGGGGTTTATCATCTTGGTACTGGCACTTCTTCTCTTTCTTCCAAGATGTAGCAAAAGGGAACGGGTCGGCAGAACTTCTAAGCAACACCAGATTGGAGCGTATGGAGGCGAAAGAACGAATCCTTGGAATAATGGGGTTCTAGTCCAACCACCTAGTCAAACTGAGAAAGTACCAAAAGCGGCTGTTGTAAGGCCAAAGGAGAATCATCAAGCAGAGAAAAATGTACAAAGAGTGGAAGCATTGCCAAAGCTATTAAGTCATGACATAGATATGAGTGGACTAGATGTAGATTCAATGCCACCTCCACCTCCACCTCCTCCTCCGCCTCCTGCTCCACCACTTGCTGCCGAGAAGGTGATCGTCGAGCCAACAACATTCCCCGGAGGGTCCAACATTAATCCTTCCAAAAGTAGTCTGGTTCCTCCAACATTTGCAAAATCGTTCACCATTGCAGCCCTTCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGATTAGGCATGTTGGGGAGTGTATATAGGGCAGAGCTTCCTAATGGGAAGATACTTGCCGTGAAGAAACTAGACAAGAGAGTTTCTGATCAAGAAGATGCTGAGTTTATTGAACTGGTTAACAATATTGACAGAATTCGGCATGCAAATATTGTTGAGCTTATCGGTTACTGTCTAGAGCATGGACAGAGGCTTCTAATCTATGAATACTGCAATAATGGATCAATGTATGAAGCACTTCATTCAGATGATGAGTTCAAAACAAGACTGTCTTGGAATGCTCGTATTCGGATAGCACTTGGGGCCGCGAGAGCCTTAGAGTACTTGCATGAGCAATGTCAGCCACCTGTTATACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGAAGATCTATCTGTGCGTGTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGTTCTGTACGTCAGCTCTCAGGACAGCTGCTAGCAGCTTACGGCTATGGGGCTCCAGAATTTGAGTCGGGAGTTTACACCTACCAGAGTGATGTTTACAGCTTTGGAGTCGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAAAAAACGTCCTCGAGGTGAGCAGTTTCTTGTAAGATGGGCAATTACTCAACTTCATGACATTGATGCATTATCAAGGATGGTTGATCCTTCTCTAAATGGAGCTTACCCTGCCAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCTGAGCCAGAATTTCGACCAGCGATGTCGGAGGTTGTCTTGTACTTGCTAAATATGATAAGGAGGGATTCTCAACAAAATGAATCAAATGAAAGATGA 2340 0.4205 MLEMRSSSLYKRMKLKIHIQVIFGLMLIFIVQFSLAATNPTDVAAINRLYAALGNPVLPGWVASAGDPCGEAWQGVQCNDSLIQEITLIGANLGGVLGDSLGPFVSIKSISLSNNHIGGSIPSSLPVTLQSLFLSGNQLTGSIPVSLSTLTELTAMSLDNNLLTGEIPDVFQSLTRLTNLDLSHNNLSGELPPSVENLSAVTTLNLQNNNLSGTLDVLQDLPLTDLNVENNQFSGPIPQKLLTITNFRKDGNQFDLNSNVTIAPARQPHSPVTASPVTTSPSGTVVSGTPSSGRVPTKQAGGPTASKDSSSGKSKKNTKRVVWITISGVLGFIILVLALLLFLPRCSKRERVGRTSKQHQIGAYGGERTNPWNNGVLVQPPSQTEKVPKAAVVRPKENHQAEKNVQRVEALPKLLSHDIDMSGLDVDSMPPPPPPPPPPPAPPLAAEKVIVEPTTFPGGSNINPSKSSLVPPTFAKSFTIAALQQYTNSFSQDNLIGLGMLGSVYRAELPNGKILAVKKLDKRVSDQEDAEFIELVNNIDRIRHANIVELIGYCLEHGQRLLIYEYCNNGSMYEALHSDDEFKTRLSWNARIRIALGAARALEYLHEQCQPPVIHRNFKSANILLDEDLSVRVSDCGLAPLITKGSVRQLSGQLLAAYGYGAPEFESGVYTYQSDVYSFGVVMLELLTGRQSYDKKRPRGEQFLVRWAITQLHDIDALSRMVDPSLNGAYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRDSQQNESNER 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03613 779 Pfam Protein tyrosine and serine/threonine kinase 493 761 IPR001245 GO:0004672|GO:0006468
Mepo6g03613 779 MobiDBLite consensus disorder prediction 423 444 - -
Mepo6g03613 779 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 567 777 - -
Mepo6g03613 779 SMART LRR_sd22_2 174 200 - -
Mepo6g03613 779 SMART LRR_sd22_2 126 147 - -
Mepo6g03613 779 Gene3D Ribonuclease Inhibitor 39 264 IPR032675 -
Mepo6g03613 779 SUPERFAMILY Protein kinase-like (PK-like) 464 763 IPR011009 -
Mepo6g03613 779 Gene3D Transferase(Phosphotransferase) domain 1 567 779 - -
Mepo6g03613 779 ProSiteProfiles Protein kinase domain profile. 490 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03613 779 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Mepo6g03613 779 MobiDBLite consensus disorder prediction 263 317 - -
Mepo6g03613 779 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 459 566 - -
Mepo6g03613 779 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Mepo6g03613 779 SUPERFAMILY L domain-like 38 246 - -
Mepo6g03613 779 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 39 265 - -
Mepo6g03613 779 Gene3D Phosphorylase Kinase; domain 1 461 566 - -
Mepo6g03613 779 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 128 773 IPR046959 -
Mepo6g03613 779 SUPERFAMILY Formin homology 2 domain (FH2 domain) 430 440 - -
Mepo6g03613 779 MobiDBLite consensus disorder prediction 427 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03613 Mepo-Chr6 48289015 48296675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03613 28 770 Strubbelig Receptor Gene Family AT4G03390 62.632 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mepo6g03613 PK_Tyr_Ser-Thr 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03613 - - mtr:25487613 1392.1