Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03578 ATGGCATATCCAACACAACAAGATCATAAACTTATTGAACAAACTCAAATTATTCCATCATCATCAACAACAACAATAACTTCTCTTCCTCTCACATTCCTTGACTTGCCTTTAGCTGGTCCAATCTATGTTAGACGCCAATTCTTCTATCACTTTCCTCATTCAACCAACCATTTTTGCAAGACAACACTTCCATCTCTCAAACACTCTCTTTCTCTTACTCTTCAACATTTCTTCCCTCTTGCTGGAAATCTCATCTCTCCACCACCACCCCACAAACCCTTTATCCTATGCACTCAAAAAGATTCTGTCACCTTTACCGTCATCGAAACCTCGGCGAATTTCAACCATCTTTCAGCCAATCACCACCCCAAAACTCTTAAAGACTATAATCACCTTGTTCCAAAATTAACACACAAAACAACCTATGATGATAATGATATTGAAAATAACACATTCATTTTCCCTTTGTTGGCTTTGCAAACTTCTGTATTCCCTAACCATGGTCTTTGCATTGCAATCACATATTGTCATGTAATGGATGATAGATGTTGTAGTCATTTCATGAAATCTTGGTCTTTTATACATAGAAATTGTGAAGCAGTTGACTTGAAGTCAACACCTTGTTTTGATAGAAAACATTTTAGGGACACAAAAGGGCTTGAGAATGTTTTCTTAAGAGACTATTTTGAAGAAAGAAAAACATGGAAAGAAAAACTCATTGTTCAAACTCAAAGTCAAGCTAGTGAAGAAGAGTATGTAAAAGCAACTATTGTTTTTGCAAAAGAAGAAATTGAGAGAATGAAAATATGGGCACTTAATCAATGGAAGAAAAATGATCATGAAGTTCAAGCGCCACAATTGTTATCTAAATTTGTTGTAACTTGTGGTTTCATTTGGGCTAGTTTGATTAAAACAAGATATAGAAATGATGATGATGATGATAAAGATGATGAAAAAGAAGAGTATTTTCGTTTTGCAGGTGATTGTAGAGAAAGACTTGGGTACAAAATACCAGAGGGGTATTTTGGGAATTGTCTAACATTATGTCATGCAACTGTGAAGAGAAAGGATATGAAGAGGGAAGATGGTTTTGTGAATGCTGTTAAAGTAATTGAAAGGGCAATAAGTGAAATGAAAAATGAACCTTTTAAAGATGTAGGTGAATGGAGGGATACATTTAAAAAGATGTATTTGGGAAGTGTGTTGTTGGTAACAGGTTCACCTAAGTTTAATGTTTATGAGACTGATTTTGGATTTGGAAAACCTGTTAAAGTTGAAATGGTGCATTCGTTTAAGTGTATGTCTATTGCTGAAAGTGGAGATAGAGAAGGTGGACTTGAGGTTGGGTTGGTATTCAAAAGTGGAGAATTTGAATATTTTTGTGCTGTCATTGAACAAGGACTTGAAGCTTTGAAATGCTAA 1425 0.3495 MAYPTQQDHKLIEQTQIIPSSSTTTITSLPLTFLDLPLAGPIYVRRQFFYHFPHSTNHFCKTTLPSLKHSLSLTLQHFFPLAGNLISPPPPHKPFILCTQKDSVTFTVIETSANFNHLSANHHPKTLKDYNHLVPKLTHKTTYDDNDIENNTFIFPLLALQTSVFPNHGLCIAITYCHVMDDRCCSHFMKSWSFIHRNCEAVDLKSTPCFDRKHFRDTKGLENVFLRDYFEERKTWKEKLIVQTQSQASEEEYVKATIVFAKEEIERMKIWALNQWKKNDHEVQAPQLLSKFVVTCGFIWASLIKTRYRNDDDDDKDDEKEEYFRFAGDCRERLGYKIPEGYFGNCLTLCHATVKRKDMKREDGFVNAVKVIERAISEMKNEPFKDVGEWRDTFKKMYLGSVLLVTGSPKFNVYETDFGFGKPVKVEMVHSFKCMSIAESGDREGGLEVGLVFKSGEFEYFCAVIEQGLEALKC 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03578 474 Gene3D - 250 472 IPR023213 -
Mepo6g03578 474 PANTHER - 10 471 - -
Mepo6g03578 474 Gene3D - 9 242 IPR023213 -
Mepo6g03578 474 Pfam Transferase family 12 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03578 Mepo-Chr6 48053792 48055216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03578 12 461 Monolignol Biosynthesis Gene Families AT5G48930 21.290 1.42e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03578 - - tpra:123894642 766.533