Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03561 ATGGGAAACAAGATTCACGCCACTGTACGAAGAACTCTAATCTACAAATTTGAGAAGGACCTGCAGGAGGGAAAGGTCTACTCTATGAGTGGCTTTGGTGTTGCTGCGAATCTTGGATCTTATCGCACCACAAAGCACGAGTACAAACTCAATTTCCAATTTAACACCGAAGTGAAATTGTGTGGCAAAAATGGCGTGCCTTCCGATATCTATCCGATATCAAATCATATTGATGTTTTCAATTCTGAATACGACACCGATTACTTAGTCGATGTCATGGGTATGTTGACCGGTGTTGGTACGCAAAGGGAATATGAACGAAATGGAGCCAAAACTAAGATGGTGGCCATGGAATTGGATTACGATGGGTTTAAATTTAAGGTCACTCTATTTGGACAATATGCTGAGGAACTTAATGCTTTTGTTGCTGTCGGGGAGACCGATAAGGTCATTGTGGTTGTCCTGCTGGCCAAAGTTAAGATCTGGCAAGATCGTAACACTCCTTCAAAAAGGATCGATCCGTCGAGGATTACCGAAGAGGAGGATTTTCTTAAGATCACAGCGAGGAAGACTGTCGAGGACTTGAAGGAGTGTACCATGGAGTCTTACTTTGTTGTGAAGGCTACGGTAAAATTTGTTATCGATACGGATGAGTGGTGGTACACTGCATGTGTTTGTAACAAGAAAGTAGTGCTGGATGAGAAAATGTACTTCTGCGCCAAGTGTAATAAGCATGTTATGCATGTTTCTCCTAGGTACATGATCAAAGTTCGCGTCATCGATGAGACTGGCTCCGCAACATTTGTCATCTTTGATCGTGATGCTGCTCTTTTGCTGAAAAAAAACTACAGCTGA 855 0.4257 MGNKIHATVRRTLIYKFEKDLQEGKVYSMSGFGVAANLGSYRTTKHEYKLNFQFNTEVKLCGKNGVPSDIYPISNHIDVFNSEYDTDYLVDVMGMLTGVGTQREYERNGAKTKMVAMELDYDGFKFKVTLFGQYAEELNAFVAVGETDKVIVVVLLAKVKIWQDRNTPSKRIDPSRITEEEDFLKITARKTVEDLKECTMESYFVVKATVKFVIDTDEWWYTACVCNKKVVLDEKMYFCAKCNKHVMHVSPRYMIKVRVIDETGSATFVIFDRDAALLLKKNYS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03561 284 CDD RPA1_DBD_B_like 91 183 - -
Mepo6g03561 284 Gene3D - 1 63 IPR012340 -
Mepo6g03561 284 Pfam Replication factor-A C terminal domain 203 280 IPR013955 -
Mepo6g03561 284 SUPERFAMILY Nucleic acid-binding proteins 2 61 IPR012340 -
Mepo6g03561 284 SUPERFAMILY Nucleic acid-binding proteins 82 190 IPR012340 -
Mepo6g03561 284 CDD RPA1_DBD_C 203 282 IPR047192 -
Mepo6g03561 284 SUPERFAMILY Nucleic acid-binding proteins 188 282 IPR012340 -
Mepo6g03561 284 CDD RPA1_DBD_A_like 2 58 - -
Mepo6g03561 284 Gene3D - 176 284 IPR012340 -
Mepo6g03561 284 Pfam Domain of unknown function DUF223 2 88 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03561 Mepo-Chr6 47871545 47874238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03561 2 264 Core DNA Replication Machinery Family AT2G06510 26.837 2.33e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03561 - - tpra:123887545 337.806