Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03559 ATGGAGTTTGACCTTGAAAACCCTCTTGAATATTTCCATGACCTTCCTAATTCTCAAGATGTCTCTTCACTTTTCCTCATTGAATCTGACCATATCCCTCCACTAAATTACTTTCAAAACCTCAAATCAAATGAGTTTGATGCCTCAGTTAGAAGTGATTTCATCTCTTTGATCTCACAGTTATCCTGCAATTTTGATCCATTTGTGACTTACCTAGCTATCAACTATTTGGATCGCTTCCTCGCTAACCAAGGAATATTGCAACCAAAGCCATGGGCAAACAAACTACTTGCAGTAACTTGCTTTTCTCTAGCAGTAAAGATGTTGAAAACAGAGTACTCTGCTACTGATGTTCAGGCTCTTATGAATCATGGTGATGGTGGTTTCATTTTTGAGACACAAACAATAAAAAGAATGGAAGCACTTGTCTTAGGAGCACTACATTGGAGAATGCGTTCCATCACACCTTTCTCTTTCATTCCTTACTTCACAAATTTGTTTAGGCTTGATGATATAACATTAAAGGTTCTAAAAGATCGAGCTTCTGAAATTATATTGAAGTCACAAAAAGATGTAAAGGTTATGGAATTTAAGCCATCTATAGTTGCTGCTTCATCCCTTCTTTATGCTTCACATGAGTTGTTTCCCTTTCAATATCCATGCTTCTTGGGAATAATATCCAATTGTTCATATGTAAATAAAGAAAGTGTTATGGAGTGCTATAATGTGATACAAGATATAGCTAAAGAGGAGTACGAATCCATGTTTAATGTGCATTCAAGTTCAGGCACACCGGTTAATGTGTTAGACGAAAATTTTCTAAGCTTGGAAAGTGAAAAAACCAACGGAACCAATGTTGCTCATACCACTATGATACAAGAGAAGCATTTCAAAAGAAGGAAAATTTAA 909 0.3586 MEFDLENPLEYFHDLPNSQDVSSLFLIESDHIPPLNYFQNLKSNEFDASVRSDFISLISQLSCNFDPFVTYLAINYLDRFLANQGILQPKPWANKLLAVTCFSLAVKMLKTEYSATDVQALMNHGDGGFIFETQTIKRMEALVLGALHWRMRSITPFSFIPYFTNLFRLDDITLKVLKDRASEIILKSQKDVKVMEFKPSIVAASSLLYASHELFPFQYPCFLGIISNCSYVNKESVMECYNVIQDIAKEEYESMFNVHSSSGTPVNVLDENFLSLESEKTNGTNVAHTTMIQEKHFKRRKI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03559 302 SUPERFAMILY Cyclin-like 136 249 IPR036915 -
Mepo6g03559 302 SUPERFAMILY Cyclin-like 22 151 IPR036915 -
Mepo6g03559 302 Gene3D - 34 152 - -
Mepo6g03559 302 SMART Cyclin_C_2 154 268 IPR004367 -
Mepo6g03559 302 Pfam Cyclin, N-terminal domain 28 151 IPR006671 -
Mepo6g03559 302 FunFam D6-type cyclin 150 242 - -
Mepo6g03559 302 PANTHER CYCLINS 31 253 IPR039361 -
Mepo6g03559 302 FunFam D6-type cyclin 34 149 - -
Mepo6g03559 302 SMART cyclin_7 53 145 IPR013763 -
Mepo6g03559 302 SMART cyclin_7 158 246 IPR013763 -
Mepo6g03559 302 Gene3D - 23 242 - -
Mepo6g03559 302 Pfam Cyclin, C-terminal domain 154 254 IPR004367 -
Mepo6g03559 302 CDD CYCLIN_AtCycD-like_rpt2 154 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03559 Mepo-Chr6 47842895 47845683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03559 1 301 Core Cell Cycle Gene Families AT4G03270 44.444 9.16e-75 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03559 K18812 - gmx:100799951 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03559 6 47842895 47845683 Mepo6g03559 6 47842895 47845683 ECH