Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03557 ATGGTGAGAACCCCTTGTGACAATAATGGATTGAGAAAAGGCACATGGACACGTGAGGAAGACAAAAAGTTGATTGCTTATGTTACTAGGTATGGCTGTTGGAATTGGCGACAACTACCTAAATTTGCAGGTCTTGAAAGGTGTGGGAAGAGTTGTAGACTAAGATGGTTGAACTATCTAAGGCCAGATATCAAAAGAGGGAGCTTTAGTCATGAAGAAGAAGAGACTATCATCAAACTTCATGAAAAATTGGGTAATAGATGGACTATGATTTCTGCAAATTTACCAGGGAGAACAGATAACGAGATAAAGAACTACTGGCACACCACCTTAAAAAAGACCCTTATAAAGAATAAGTCAAACGCTAAACGTGGAACGAAAAAAGCCAAAGACTCAAATTCAAAAAATCACCCTACAATGGAAAAACCCAAGAAACTAGGAGAAATGTTAGAGAGCAACGGCGGTTCCAATATTACGAGTCCACCATCTTCACAACCATCTACAAGTGCATCCTCTTGCATAGCATTAATGGATACTGCAGCCACTACAATATCATATGAAAATTCTTCTCTTTTTGATGACTATGACCTTCCTTTTATGGATGCATACATGGAGACTGTGAGTGAAAATTTCTGGGCAGAGCCATATATAATAGACAGCTCGTATGTCCCTCCAAGTGAAGATTCTATTATATTACTTGAACATGAATATTTTAGTCATGTATATGATGTAGAACTTTGGAGCCATGGAAAATAA 756 0.3783 MVRTPCDNNGLRKGTWTREEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWLNYLRPDIKRGSFSHEEEETIIKLHEKLGNRWTMISANLPGRTDNEIKNYWHTTLKKTLIKNKSNAKRGTKKAKDSNSKNHPTMEKPKKLGEMLESNGGSNITSPPSSQPSTSASSCIALMDTAATTISYENSSLFDDYDLPFMDAYMETVSENFWAEPYIIDSSYVPPSEDSIILLEHEYFSHVYDVELWSHGK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03557 251 Gene3D - 67 146 - -
Mepo6g03557 251 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mepo6g03557 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Mepo6g03557 251 MobiDBLite consensus disorder prediction 125 148 - -
Mepo6g03557 251 FunFam MYB-related transcription factor 12 65 - -
Mepo6g03557 251 MobiDBLite consensus disorder prediction 118 171 - -
Mepo6g03557 251 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mepo6g03557 251 CDD SANT 68 111 IPR001005 -
Mepo6g03557 251 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mepo6g03557 251 Gene3D - 13 65 - -
Mepo6g03557 251 CDD SANT 15 60 IPR001005 -
Mepo6g03557 251 MobiDBLite consensus disorder prediction 152 171 - -
Mepo6g03557 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Mepo6g03557 251 SMART sant 12 62 IPR001005 -
Mepo6g03557 251 SMART sant 65 113 IPR001005 -
Mepo6g03557 251 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mepo6g03557 251 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Mepo6g03557 251 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03557 Mepo-Chr6 47794027 47827120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03557 1 221 MYB Transcription Factor Family AT2G31180 47.768 2.71e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo6g03557 Myb_DNA-binding 1.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03557 K09422 - mtr:11411430 333.183