Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03555 ATGTTCAATATGATGAAACCATGGTTCTGGCTTTCTGTTCTAACATTCTTCTTCTCTATACACTTCTATCCTTCCCTTGCAGCTCTAACTACCATCTCAGCAAAACAATCTCTCTCTGGTGACCAAACTCTTATTTCTAAAGGAGGAATCTTTGAACTAGGTTTCTTCAAACCAGGTAATTCCTCTAACTACTACATAGGCATATGGTACAAAAAGGTCATTGAACAAACAATTGTTTGGGTAGCCAACAGAGACAATCCTGTCTCTGACAAAAACACTGCCACCTTAAAAATCTTAGCTGGTAATTTAGTTCTATTAAATGAGTCTTCAAAACAAGTTTGGTCAACAAACATGAATATTCCTAAGTCAGATTCTGTTGTAGCTATGCTTCTAGATAGTGGAAATCTTGTTTTGAAAAATAGGCCTAATGATGATGTATTAGATTCTCTATGGCAAAGTTTTGATCATCCAGCAGATACATGGCTTCCTGGTGGTAAAATTAAGCTAGACAATAAAACAAAGAAGCCTCAGTATCTTACTTCATGGAAGAATAGAAAAGATCCTGCAACAGGCCTTTTCTCTTTGGAACTAGACCCAAAAGGAACATCTTCATATCTTATTCTTTGGAATAAGTCTGAAGAGTATTGGACAAGTGGACCTTGGGATGGACATATTTTTAGTTTGGTTCCTGAGATGAGGGCAAATTATATCTTCAATTTTTCGTTTGTGTCGAACGAGAATGAAAGCTACTTCACCTATTCCATGTATAACCCTTCGATTATATCGCGGTTTGTGATGGATATCTCAGGGCAGATTAAGCAACTTACATGGTTGGAAGGTATCAATCAGTGGAACTTGTTTTGGGCGCAGCCAAGACAACATTGTGAGGCTTATGCTTTATGCGGTTCGTTTGGGAGCTGCACTGAGAACTCAAAGCCGTATTGTAATTGTTTGAGTGGTTATGAGCCAAAGTCACAGTCTGATTGGGATTTGGAGGATCACTCAGGTGGGTGTATGAGAAAAACAAGGTTACAATGCGAGAGTTCTCATCGCTCTAATGGGGTGAAGGACAGGTTCCGCGCAATCCCCAACATGGCATTGCCTAAACATGCAAAACCTGTGGTATCAGGAAATGTAGAGGAATGTGAATCAATATGCTTGAACCATTGCTCTTGTTCTGCTTATTCATATGATAGTAATGAATGTTCAATTTGGATTGAAGACCTCCTAAATCTCCAACAGTTACCTTCAGATGATAGTAGTGGAAAAACTTTGTATCTAAAACTAGCAGCATCAGAATTTAGTGATGCTAAAAACAATAATGGGGTGATTATCGGTGTTGTAGTAGGCGCTGTTGTTGGCATAGGGATTCTCTTGGCACTTCTTCTGTTTGTCATGCTTAGGCGAAGAAAGAAAACAGTTGGAACAGGTAAGCCTGTGGAGGGTTCGTTGGTGGCATTTGGGTACAGAGATATGCAAAATGCGACTAAGAATTTCTCCGAGAAATTGGGCGGAGGAGGATTCGGTTCTGTTTTCAAAGGAACATTGGCTGATTCAAATGTGGTGGCAGTGAAGAAGCTGGAAAGTGTTAGCCAAGGAGAGAAACAATTCAGAACTGAAGTGAGTACAATAGGGACAGTGCAACATGTTAACCTTGTCCGGCTCCGAGGATTCTGTTCAGAAGGTACCAAAAGAATGCTGGTTTATGATTACATGCCTAATGGTTCCTTGGATTTCCATTTATTCTTGAAAAAAGACTCTTCTAAGGTGTTGGACTGGAAACTGAGATACCAAATTGCTATTGGAATTGCAAGGGGATTAACATACCTCCACGAGAAGTGCCGAGACTGTATCATACACTGCGATGTAAAGCCAGAAAACATTCTCCTGGACACCGATTTTTGTCCTAAAGTTGCAGACTTCGGCCTGGCTAAGCTGGTCGGACGAGATTTCAGCAGGGTCCTAACAACTATGAGAGGAACAAGAGGCTACCTTGCTCCGGAGTGGATTTCTGGTGTGGCTATTACAGCCAAAGCCGATGTTTATAGCTACGGAATGATGCTTTTCGAGGTTGTATCTGGTAGGAGGAATTCCGATCCATCAGAAGATGGTCAAGTAACTTTCTTTCCTACCTTAGCTGCAAAAGTAGTTATTGAAGGTGGAAGTGTCATCACCCTTTTGGACCCTAGGTTGCAGGGAAATGCAGACATTGAAGAGGTTGCGCGAATAATTAAAGTCGCTTCCTGGTGTGTCCAAGACAATGAAAATCAAAGGCCAACAATGGGTCAGGTAGTTCAAATTCTCGAGGGCATTTTGGAAGTGAATTTGCCACCAATTCCAAGGTCTCTTCAAATGTTTGTTGATAACGATGAGAACGTGGTTTTCTACACTGATTCTAGCTCAACTCAAAGTTCACAGGTAAAGAGTAACATCTCAGCAACCTCTCAGGTCCAAAGCAATATCTCAGCAACCTCTCAGGTCCAAAGCAATATCTCATCAGCTAGCTCTAAGTCATCAGCAGAAAATTAG 2529 0.41 MFNMMKPWFWLSVLTFFFSIHFYPSLAALTTISAKQSLSGDQTLISKGGIFELGFFKPGNSSNYYIGIWYKKVIEQTIVWVANRDNPVSDKNTATLKILAGNLVLLNESSKQVWSTNMNIPKSDSVVAMLLDSGNLVLKNRPNDDVLDSLWQSFDHPADTWLPGGKIKLDNKTKKPQYLTSWKNRKDPATGLFSLELDPKGTSSYLILWNKSEEYWTSGPWDGHIFSLVPEMRANYIFNFSFVSNENESYFTYSMYNPSIISRFVMDISGQIKQLTWLEGINQWNLFWAQPRQHCEAYALCGSFGSCTENSKPYCNCLSGYEPKSQSDWDLEDHSGGCMRKTRLQCESSHRSNGVKDRFRAIPNMALPKHAKPVVSGNVEECESICLNHCSCSAYSYDSNECSIWIEDLLNLQQLPSDDSSGKTLYLKLAASEFSDAKNNNGVIIGVVVGAVVGIGILLALLLFVMLRRRKKTVGTGKPVEGSLVAFGYRDMQNATKNFSEKLGGGGFGSVFKGTLADSNVVAVKKLESVSQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTKRMLVYDYMPNGSLDFHLFLKKDSSKVLDWKLRYQIAIGIARGLTYLHEKCRDCIIHCDVKPENILLDTDFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEVVSGRRNSDPSEDGQVTFFPTLAAKVVIEGGSVITLLDPRLQGNADIEEVARIIKVASWCVQDNENQRPTMGQVVQILEGILEVNLPPIPRSLQMFVDNDENVVFYTDSSSTQSSQVKSNISATSQVQSNISATSQVQSNISSASSKSSAEN 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03555 842 CDD B_lectin 36 157 IPR001480 -
Mepo6g03555 842 SMART ntp_6 354 429 IPR003609 -
Mepo6g03555 842 PANTHER OS07G0415500 PROTEIN 12 780 - -
Mepo6g03555 842 SUPERFAMILY Hairpin loop containing domain-like 355 412 - -
Mepo6g03555 842 Pfam PAN-like domain 355 411 IPR003609 -
Mepo6g03555 842 Gene3D Transferase(Phosphotransferase) domain 1 572 776 - -
Mepo6g03555 842 SMART blect_4 35 157 IPR001480 -
Mepo6g03555 842 SMART serkin_6 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03555 842 FunFam Serine/threonine-protein kinase 572 776 - -
Mepo6g03555 842 ProSitePatterns Protein kinases ATP-binding region signature. 503 526 IPR017441 GO:0005524
Mepo6g03555 842 FunFam Serine/threonine-protein kinase 464 571 - -
Mepo6g03555 842 CDD STKc_IRAK 503 771 - -
Mepo6g03555 842 PIRSF SRK 1 825 IPR024171 GO:0004674
Mepo6g03555 842 CDD PAN_AP_plant 342 430 - -
Mepo6g03555 842 ProSiteProfiles PAN/Apple domain profile. 346 430 IPR003609 -
Mepo6g03555 842 Gene3D - 26 154 IPR036426 -
Mepo6g03555 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Mepo6g03555 842 FunFam Serine/threonine-protein kinase 24 154 - -
Mepo6g03555 842 SUPERFAMILY Protein kinase-like (PK-like) 483 801 IPR011009 -
Mepo6g03555 842 MobiDBLite consensus disorder prediction 819 842 - -
Mepo6g03555 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 221 IPR036426 -
Mepo6g03555 842 Gene3D Phosphorylase Kinase; domain 1 464 571 - -
Mepo6g03555 842 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Mepo6g03555 842 Pfam D-mannose binding lectin 77 183 IPR001480 -
Mepo6g03555 842 ProSiteProfiles Protein kinase domain profile. 497 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03555 842 Pfam Protein kinase domain 500 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03555 842 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03555 Mepo-Chr6 47765172 47767940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03555 451 778 Receptor kinase-like Gene Family AT5G20050 41.713 1.05e-79 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo6g03555 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03555 - - gmx:100782119 1234.55