Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03552 ATGAAGAAAAACTGTGAACTCTGCAAACTTCCAGCTAGAACTTTCTGTGAGTCCGACCAGGCTAGCTTATGCTGGGACTGCGATTCTAAGGTTCACGCTGCTAACTTTTTGGTTGAGAGACACATGAGAACTCTCCTCTGTCACGCTTGTCAATCTCCCACACCGTGGAAAGCCTCCGGCGCTAGGCTCGGTAACGCGCTTTCCTTGTGTGATAGATGCGCCGGCGGAAGAAAACTCCATGCCCACGCCAACGCCAACGCCGGTGCCAGCGCCGAGCAACAAGAAGAAAGTGAAGGCGACAATGACAATGAAGAAGACACCGATTATGATTCTGATTCTGATGAGGATGTTGATGGTGATGAGGACGGTGATAATCAGGTTGTACCTTGGTCGTCAACGGCGGCGCAGCCACCACCGGCTTCGAGTTCTTCCGGTAGCGATGAGTCAGTTACGGTTAGCAAGTGCAACGATAACCACGATGAGGTTGTTTCGAAGTTAGTTACAACGATTTCTTTGAAACGACGTCGTTTGGATCATGATTTTCAGGTTTCGGATACAAAAAATTGGAAAAATCAACGAAGAGAGGTGGATGAGGTTGATTTGATAGGGTGCGACGGGGAACCGTCGTCGAAGGCGGCGATGCGGCGGTATAGCGACGTAAATGGAACGGAGCATTCTCAGCCACACGATTGA 693 0.5007 MKKNCELCKLPARTFCESDQASLCWDCDSKVHAANFLVERHMRTLLCHACQSPTPWKASGARLGNALSLCDRCAGGRKLHAHANANAGASAEQQEESEGDNDNEEDTDYDSDSDEDVDGDEDGDNQVVPWSSTAAQPPPASSSSGSDESVTVSKCNDNHDEVVSKLVTTISLKRRRLDHDFQVSDTKNWKNQRREVDEVDLIGCDGEPSSKAAMRRYSDVNGTEHSQPHD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03552 230 MobiDBLite consensus disorder prediction 84 156 - -
Mepo6g03552 230 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 190 - -
Mepo6g03552 230 MobiDBLite consensus disorder prediction 126 152 - -
Mepo6g03552 230 SMART bboxneu5 1 46 IPR000315 GO:0008270
Mepo6g03552 230 MobiDBLite consensus disorder prediction 202 230 - -
Mepo6g03552 230 Pfam B-box zinc finger 3 33 IPR000315 GO:0008270
Mepo6g03552 230 MobiDBLite consensus disorder prediction 95 123 - -
Mepo6g03552 230 CDD Bbox1_BBX-like 5 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03552 Mepo-Chr6 47731925 47733223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03552 2 188 C2C2-CO-like Transcription Factor Family AT5G54470 48.128 2.20e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo6g03552 zf-B_box 5.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03552 - - mtr:11417549 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03552 6 47731925 47733223 Mepo6g03552 6 47731925 47733223 ECH