Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03537 ATGCACGTCCACATGAAAGCTGAGTTAAAAGCAACATCCATTTCCTTTCAAAACCCAACACTCTTCAACACACACCAAAACACTCCTCCTCTTCCTGAACCAGAAGAACTCAAAGGTTGTCTTGGAAGCTTAGATGGAGCATGTATTGAAAAGCTCTTACTTCATTGTGCAAGTGCTTTGGAAAGCAATGATATAACCTTAGCTCAGCAAGTTATGTGGGTCTTAAACAACGTTGCTTCACCATTAGGTGACACAAATCAAAGACTCACTTCATGGTTTCTAAGAGCATTAATCTCTAGAGCTTCAAGGATTTGTCCTACTTCAATGAATTTCAAAGGAAGTAACTACACAATTCAAAGAAGGTTGATGTCCGTTACCGAACTCGCCGGGTATGTTGATTTAATTCCTTGGCATAGGTTTGGTTTTTGTGCTTCCAACAATGAAATTTTCAAGTCAATTAAGGGATTCAAAAGGGTACATATTTTAGATTTTAGCATAACACCTTGTATGCAATGGCCTACTTTTATAGATTCTTTGGCTAAATTACCAGAAGGTCCTCCTTCACTTAGAATCACAGTTCCATCTTTTAGGCCAATGGTTCCTCCTTTGGTTAACATATCAATACATGAAGTAGGTCAACGTTTAGGTAACTTTGCAAAATTTAAGGATGTCCCTTTTGAGTTTAATGTTATTGGAGATAATGTTTCATTGACTTCTGAAGATTTGAGCAATATTGAATCAACAAATTTTCATTTTGAATCAATGTTGAGTCTCTTGAATCCTAGTATGTTGAATCTTAGGGAAGATGAAGCTTTGGTTATAAATTGCCAAAATTGGTTACGTTATTTATCTGATGATAGAAAGGGTCAAAATATTTCACTTAGAGATGCTTTTATGAATTTAGTTAAAGGACTTAACCCTCAAATAGTGCTATTGGTTGATGAGGATTGTGATCTTAGTGCATCAAGTTTAACATCAAGAATTACTGCTTCTTTTAACCATTTATGGATACCCTTTGATGCATTGGACACTTTTTTGCCTAAAGATAGTTGTCAAAGGACAGAGTTTGAATCTGACATAGGACAGAAAATTGAGAATATTATAAGCTTTGAAGGGCATCAAAGGATAGAAAGATTGGAGTCAGGGATGCAAATGTCACAAAGAATGAAAAATGCTGGTTACTTTAGTGTTCCATTTTGTGAGGAAACTATTTTGGAAGTTAAAGGTTTACTTGATGAACATGCAAGTGGATGGGGAATGAAAAGAGAAGAAAGCATGTTGGTTCTTACATGGAAAGGAAATAGTTGTGTGTTTGCGACAGCTTGGGTCCCTAGTGAAATTCGGGATCATATCAGTATGGATGCACATGTGTCTTAA 1377 0.3602 MHVHMKAELKATSISFQNPTLFNTHQNTPPLPEPEELKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNYTIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKSIKGFKRVHILDFSITPCMQWPTFIDSLAKLPEGPPSLRITVPSFRPMVPPLVNISIHEVGQRLGNFAKFKDVPFEFNVIGDNVSLTSEDLSNIESTNFHFESMLSLLNPSMLNLREDEALVINCQNWLRYLSDDRKGQNISLRDAFMNLVKGLNPQIVLLVDEDCDLSASSLTSRITASFNHLWIPFDALDTFLPKDSCQRTEFESDIGQKIENIISFEGHQRIERLESGMQMSQRMKNAGYFSVPFCEETILEVKGLLDEHASGWGMKREESMLVLTWKGNSCVFATAWVPSEIRDHISMDAHVS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03537 458 ProSiteProfiles GRAS family profile. 40 443 IPR005202 -
Mepo6g03537 458 Pfam GRAS domain family 50 442 IPR005202 -
Mepo6g03537 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 49 432 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03537 Mepo-Chr6 47559119 47560495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03537 12 444 GRAS Transcription Factor Family AT3G49950 43.665 1.95e-118 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo6g03537 GRAS 3.7e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03537 - - gmx:100805056 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03537 6 47559119 47560495 Mepo6g03537 6 47559119 47560495 ECH