Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03535 ATGGACCCAAATTCAATCTTCTCTGGTGACACCACCACCACCACCACCATAGACCCAATCTTCTCCAACTTCACCCTCCAATCTCTTCTCACTCTCAACCCTTCTTACTTCTCAGACAACTATCACCACACTTTAACTGACGATTCACCTCCTCTACCAAATTTCCCTGAATCCATTGACCATCTTTTCAACAAAAAACACTTCCTTGTTCCAAAACCAGAACACCCTTTTAACCTACCTTCATTACAAGAATATCTTCCACTTCAACCACAACAACAACCCTTCAACTTCTTCCCTAAACACCTACCACCTTTTCAACCTCTCCACCGTCTTCCTCAACTCCGTTCACCGGAACCCACCAACAGAAAACGTCTCCACCCAGAAACCACCCCATCACCACCTGGAAAAAACCCTTCAACTTCTTCTTTGATCCCTCAAAGCAACTTAGCAAGACAAAGAAGACAAAAACTAAGCGAGAAAACACGCTGTCTTCAGAAACTAATGCCATGGGACAAGAAAATGGATCAAGCTACTCTTTATGAAGAAGCTTACAAATATGTTAAGTTTTTGAAGGCACAGTTATCTGTTCTTCAAACAATGCCTTCTTACGGTGTTGACAACTGCGGTGGCGGAACCGCTTCTGTTGGTGTTTTTGATGACTTGGACAAGCTGAACAGAAACCAAGCTTTGCAGATTCTGGTGAACTCACCGGTTGCACAAACAAAGCTTTGTGAAAGAGGTTACTGTGTTTTCTCCATGGAACAATTCTCTTTGCTCAGAAAATTATCAGAGAAAAGACAACATGAGAATTTTTCTGAACATGGTTCTTCAAAAACTTTCTTTCATTGA 849 0.4181 MDPNSIFSGDTTTTTTIDPIFSNFTLQSLLTLNPSYFSDNYHHTLTDDSPPLPNFPESIDHLFNKKHFLVPKPEHPFNLPSLQEYLPLQPQQQPFNFFPKHLPPFQPLHRLPQLRSPEPTNRKRLHPETTPSPPGKNPSTSSLIPQSNLARQRRQKLSEKTRCLQKLMPWDKKMDQATLYEEAYKYVKFLKAQLSVLQTMPSYGVDNCGGGTASVGVFDDLDKLNRNQALQILVNSPVAQTKLCERGYCVFSMEQFSLLRKLSEKRQHENFSEHGSSKTFFH 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03535 282 MobiDBLite consensus disorder prediction 135 152 - -
Mepo6g03535 282 MobiDBLite consensus disorder prediction 108 158 - -
Mepo6g03535 282 Gene3D - 145 202 IPR036638 GO:0046983
Mepo6g03535 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 199 IPR036638 GO:0046983
Mepo6g03535 282 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 125 262 IPR045843 GO:0003700|GO:0006355
Mepo6g03535 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 190 IPR011598 GO:0046983
Mepo6g03535 282 SMART finulus 147 196 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03535 Mepo-Chr6 47532286 47533134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03535 153 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 46.847 7.67e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03535 - - psat:127083335 313.538