Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03533 ATGACAAAACCTTGTTATATCGTTGTTTATGTTCTTCTTCTTTGTGCTTTAGAAAAAGGATGCTCAGAGGGCAAGAGGTGGAAACATGATGAGTTTTTTAGAGATCATGTTGGAGAAAAGGCCGAGCAGGTGTGGAAACATTGTAGGAAGGCAATGATGGAGAGGAATAATGATATCAACGAATTTGATTTGCATCTATTGGATGAGACTGGCGAAAAGAGATTTAATTTTCTATCTCCCCATATGAAACAACACTTTCTGGATTGCATAAGAAACACAAAACCTCTGATTTCCGAAGAGGAGGGACATTTGTTGAAGAAGCATTATGAGTCACTCTTCGGTTTATTAGATGGACATAGATATTTACTCTCTAAGTCACAACATAATCAGACACCACTGAGCCCTGATTCTGTTCCATCATCTGGATCATCACCAAAACTGAAAACTCATGTTGCAGCACAAGCCACTTCTCTAACTCCTGAGAACTCGTATGACGATTTTTCGTTCCTATTTACATCACCACCATCACCACCTCCTCCTCATTCTACTTTTGATCCTACGCATGATGAAAAACAACGGAAAGCAATTATTGTTGCTGTAGCTGCATCAGGAATTATAATCTTAATAGGCTTGTTGTTATGCTGTCGCGAGGCGAGGAAGAGCAAAAAAGTAGACAAAAATGACAAGCCTTTACTCATATTAAGCGCAACTGGCTTCTCTGGTGGTATTTCACAAAAGTGTGTTGGTTTTGAGAATTCTGATACGAGAGAATATGGTCATGGTATTATCTATGGAATGAATCCTTCTACTGTTAGGAATTTGTCCATTAAGCATGAAAATAACAATGTTTCACTGGCTGATGGCAAAGGAAAAGAACCAGTGTCTCCATTAAATCCTCCTCCAGGAAGATCAGCTTCTGAGGCTCCACCGCCGCCGCCTCCACCGCCTGCTCTTGCACCTCGGCCTCCACCTCCTCCAAAAATGGTTAGGCCTCCACCTGCTCCTCCCAAACCAATGGCAGGTAGAAACCAAAAGTCACCTCTAGGACCACTTCGTACTAGTGAGGATGATGATGAATGTGATGCTCCGAAAGCGAAATTAAAGCCGTTCTTCTGGGATAAGGTTGCTGCAAACCCTGATCAAGCTATGGTCTGGCATGATATCAGAGCAGGATCGTTCCAGTTCAGTGAAGAAAAGATAGAATCTTTATTCGGCTGCATCAATCAGAACAGAAATGAAAGAAGAAAAGATTCTCCATCTTTAGAACCTGCTGTCCAGTACATTCAGATAATTAACCCCAAGAAAGCGCAGAATTTATCAATTCTTTTACGTGCTCTGAATGTGAGCACAGAAGAAGTTATTGATGCCCTAAAAGAAGGCAATGAGATTCCTGTTGAGCTCATCCAAACAGTATTGAAGATGGCGCCAACATCGGATGAGGAATTGAAGCTAAGGTTATTCACAGGCGAGGTTTCTCAACTTGGCCCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATATACCATTGGCTTTCAAACGTCTTGAGTCTCTACTGTTCATGTTTACCCTTCGGGAAGAGGCTTCAAGCATTAAGGAATGCTTTACAACATTAGAGGTATCTTGCAACAAACTAAGAAAAAGCAGGCTCTTCCAAAAGCTATTAGAAGCAGTTCTAAAGACAGGAAACCGATTGAACGATGGAACCTATCGTGGTGGGGCTCACGCGTTTAGGCTTGACACACTTTTGAAACTTGCAGATGTAAAAGGAACAGACGGCAAGACCACATTATTACACTTTGTGGTTCAAGAGATCATACGTTCAGAGGGCATAAGAACTGTAAGAACAGCAAAAGCAAGCCAAAGCCATTCTAGTATGAAAACCGAGGATTTTATCGATGATTCAAATGGGGAATCAGAAGAACACTATCGCAGCCTTGGCCTTCAAGTAATTTCAGGTCTAAGCACTGAGCTAGAAGATGTGAAAAAGGCAGCAGTAATAGATGGTAATGCTCTAACAGCTGCAGTATTGAAACTTGATCACACATTGGCAAAAGCTGAAGAACTGTTGAATACTGATCTGAAAAATCTAGAAGAAGACAGCGAGTTTCAACATTCCCTTGCAAGTTTTGTGAACAAAGCAAAAGAGGAAGTGAAATGGTTGGTAGGGGAAGAGAAGAGGATAATATCCGAGGTTAAGAGCACAGCAGATTATTTTCATGGGAATGCAGGAAAAGATGAAGGGTTACGTTTGTTTGTGATTGTACGCGATTTCTTGTTAATGTTGGACAAGGTGTGCAAAGAGATAAAAGTATCAACCAAGAGAGTAGAGGTGAAGGGTTATTCTTCTTGCAAGATGGAGGGTCCTTCACCAGCATCCTCTCCAGATACTCATCAACAATCGCCTTCTGATATGCATAGGAGACTATTTCCAGCCATAGCAGAGAGAAGAATACACGACTTCAGTTCCTCCTCATCCGACGATGATGATGATGAGAGGTTAGCAACGTAG 2508 0.4175 MTKPCYIVVYVLLLCALEKGCSEGKRWKHDEFFRDHVGEKAEQVWKHCRKAMMERNNDINEFDLHLLDETGEKRFNFLSPHMKQHFLDCIRNTKPLISEEEGHLLKKHYESLFGLLDGHRYLLSKSQHNQTPLSPDSVPSSGSSPKLKTHVAAQATSLTPENSYDDFSFLFTSPPSPPPPHSTFDPTHDEKQRKAIIVAVAASGIIILIGLLLCCREARKSKKVDKNDKPLLILSATGFSGGISQKCVGFENSDTREYGHGIIYGMNPSTVRNLSIKHENNNVSLADGKGKEPVSPLNPPPGRSASEAPPPPPPPPALAPRPPPPPKMVRPPPAPPKPMAGRNQKSPLGPLRTSEDDDECDAPKAKLKPFFWDKVAANPDQAMVWHDIRAGSFQFSEEKIESLFGCINQNRNERRKDSPSLEPAVQYIQIINPKKAQNLSILLRALNVSTEEVIDALKEGNEIPVELIQTVLKMAPTSDEELKLRLFTGEVSQLGPAERFLKALVDIPLAFKRLESLLFMFTLREEASSIKECFTTLEVSCNKLRKSRLFQKLLEAVLKTGNRLNDGTYRGGAHAFRLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRTVRTAKASQSHSSMKTEDFIDDSNGESEEHYRSLGLQVISGLSTELEDVKKAAVIDGNALTAAVLKLDHTLAKAEELLNTDLKNLEEDSEFQHSLASFVNKAKEEVKWLVGEEKRIISEVKSTADYFHGNAGKDEGLRLFVIVRDFLLMLDKVCKEIKVSTKRVEVKGYSSCKMEGPSPASSPDTHQQSPSDMHRRLFPAIAERRIHDFSSSSSDDDDDERLAT 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03533 835 SMART it6_source 357 776 IPR015425 -
Mepo6g03533 835 ProSiteProfiles Formin homology-2 (FH2) domain profile. 357 787 IPR015425 -
Mepo6g03533 835 PANTHER FORMIN-RELATED 126 821 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mepo6g03533 835 Gene3D Formin, FH2 domain 362 781 IPR042201 -
Mepo6g03533 835 MobiDBLite consensus disorder prediction 294 340 - -
Mepo6g03533 835 MobiDBLite consensus disorder prediction 808 835 - -
Mepo6g03533 835 Pfam Formin Homology 2 Domain 361 761 IPR015425 -
Mepo6g03533 835 MobiDBLite consensus disorder prediction 779 835 - -
Mepo6g03533 835 MobiDBLite consensus disorder prediction 283 362 - -
Mepo6g03533 835 MobiDBLite consensus disorder prediction 127 153 - -
Mepo6g03533 835 SUPERFAMILY Formin homology 2 domain (FH2 domain) 370 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03533 Mepo-Chr6 47522915 47527613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03533 309 817 FH2 protein (formin) Gene Family AT5G54650 54.464 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03533 - - psat:127086789 1044.65