Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03525 ATGGCAAAGGATAAGGAGCAAAGCAGTTCAGATTACAGAAGCTGTGTTCCATCCAATCCGATCCATTCCGATCCGATCCAATTCATTCCATTTCATTTCATTCCATCAGGAGCATTTATGGAAGCTCTATGTGAGTTTTGTGGGGTTGCAAGAGCTGTGGTTTACTGCAAGCCTGATTCCGCTCGTCTTTGCTTGCATTGTGATGGGATTGTCCACTCTGCAAATTCTCTGTCTCGCAGGCATCCTCGCTCGCTCCTCTGCGATAAGTGTAATTTCGACTCAGCAATCATGCGCTGCGTCGATCATAAACTGTCTCTCTGTCAAGTTTGTGATTGGAATACAAATGACTGTTTTGTATTGGGACATAAACATGTGCTACTCACTTTCTACACTGGTTGTCCCTCTTTGGCAGAGTTATCTAAGATTTGGCCACATTTGGTTGATGCAAATTCATCAAATGCTGCTTGGGAATCACCTAGTACTAGTGCTTTGCCTAAAACTGAAAGCAGTGACCGCCGCAATCAACATTTGGAGCAGCAACCTGAAAAAAATGGCTTCGTTGGTTTGGCGAATGACAAGTTGGGCGAAGGAGATCCGTGTGTCAAATATGAACCTTGGATTGAAAATTCTCCTATTATTCCATCAAATTCAAACTGCACACAATACTACAAAGATCAAGCATTTTTATTTAATCAAGACTCAAACCAACCGAAGGCTTCTTCATCAGTTCATCAAGATTGTATGATTTTTCCATCATCAGGGGTTGGTGGATCATCAAATTTGATGCAGGGCATCAACAATGGTGCAAATTGTGCACTTATGACTCCTAGTTGTAACAGAAGCATGCCTCTAGGGTTTCCTCAAAGTCAAACTCATTCAGGCATATCAATTCAATTACCTAACATAAATGGTGAAAGCAATGTTGCTGAACTTCTAGATTGTGGGTTACCTCCAGTGTTTCATCCTGGTGAATCGCATTGGGAATCTAATTTGGAGGGTGCATGTCCTCAAGCAAGGGATAAAGCCAAAATGAGATACCAAGAGAAAAAGAAAACTCGAACGTTTGGTAAGCAAATAAGATATGCGTCTCGCAAAGCAAGGGCTGATACAAGAAAACGCGTGAAAGGTAGATTTGTTAAAGCAGGTGAAGCATATGACTATGATCCTCTTTTGAGCGACCACTAA 1185 0.4177 MAKDKEQSSSDYRSCVPSNPIHSDPIQFIPFHFIPSGAFMEALCEFCGVARAVVYCKPDSARLCLHCDGIVHSANSLSRRHPRSLLCDKCNFDSAIMRCVDHKLSLCQVCDWNTNDCFVLGHKHVLLTFYTGCPSLAELSKIWPHLVDANSSNAAWESPSTSALPKTESSDRRNQHLEQQPEKNGFVGLANDKLGEGDPCVKYEPWIENSPIIPSNSNCTQYYKDQAFLFNQDSNQPKASSSVHQDCMIFPSSGVGGSSNLMQGINNGANCALMTPSCNRSMPLGFPQSQTHSGISIQLPNINGESNVAELLDCGLPPVFHPGESHWESNLEGACPQARDKAKMRYQEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLLSDH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03525 394 Pfam CCT motif 339 381 IPR010402 GO:0005515
Mepo6g03525 394 ProSiteProfiles CCT domain profile. 339 381 IPR010402 GO:0005515
Mepo6g03525 394 CDD Bbox1_BBX-like 43 86 - -
Mepo6g03525 394 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 40 384 - -
Mepo6g03525 394 SMART bboxneu5 39 86 IPR000315 GO:0008270
Mepo6g03525 394 ProSiteProfiles Zinc finger B-box type profile. 39 86 IPR000315 GO:0008270
Mepo6g03525 394 MobiDBLite consensus disorder prediction 153 168 - -
Mepo6g03525 394 MobiDBLite consensus disorder prediction 153 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03525 Mepo-Chr6 47465429 47469796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03525 40 389 C2C2-CO-like Transcription Factor Family AT3G21880 38.338 5.81e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo6g03525 CCT 1.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03525 - - cam:101499105 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03525 6 47465429 47469796 Mepo6g03525 6 47465429 47469796 ECH