Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03516 ATGGACAACGTGGAATGCTCCTCTGAGGAAGTTTCTTCTGATTCTTCTATAGCAGTGCAATCCAATTCCAGTGACACTCAAGCAAATTCCAAGGTAGAATTTTCTAAAGATGAGGAAGATCTTATCATCAGAATGTATAAACTAGTGGGAGATAGGTGGCCTTTAATTGCGGGAAGAATACCTGGAAGAACAGCTGAAGAAATAAAGAATTACTGGACTTCAAGATCCTCTTCCACTAGCCAATGA 246 0.3984 MDNVECSSEEVSSDSSIAVQSNSSDTQANSKVEFSKDEEDLIIRMYKLVGDRWPLIAGRIPGRTAEEIKNYWTSRSSSTSQ 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03516 81 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 32 76 - -
Mepo6g03516 81 Gene3D - 33 75 - -
Mepo6g03516 81 FunFam MYB-like transcription factor 33 75 - -
Mepo6g03516 81 ProSiteProfiles Myb-like domain profile. 26 76 IPR001005 -
Mepo6g03516 81 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 80 IPR017930 -
Mepo6g03516 81 MobiDBLite consensus disorder prediction 1 34 - -
Mepo6g03516 81 Pfam Myb-like DNA-binding domain 31 73 IPR001005 -
Mepo6g03516 81 SUPERFAMILY Homeodomain-like 33 74 IPR009057 -
Mepo6g03516 81 CDD SANT 33 72 IPR001005 -
Mepo6g03516 81 SMART sant 30 78 IPR001005 -
Mepo6g03516 81 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03516 Mepo-Chr6 47394285 47395441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03516 34 77 MYB Transcription Factor Family AT5G14750 59.091 1.31e-16 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo6g03516 Myb_DNA-binding 5.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03516 - - psat:127083327 128.257