Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03507 ATGGAGGTGTTAGGAGTAAAGGGTTTTGTCCTCTTGTTTTTCTGTTTGTGGATTCCAAATGAAGTTGTGGCTATAATTGGAAACTCTACTGTTTCTTCTAGACCAACTGTTGTGAAAATTGGAGCACTGTTTACTGTTGATTCTGTGATTGGAAGATCAGCTCAACAAGGAATCAAAACTGCAATTGATGATGTTAATGCTAATAAGACTATTCTTCCTGGTATTAAAATGGATGTTATTTTTCATGATACAAATTGCAGTGGATTTATTGGAACAGTTGAAGCTTTGCAGTTGATGGAGAATGAAGTGATTGCCACAATTGGTCCACAGTCCTCAGGAATAGCTCATATCATCGCTCATGTAGCTAATGAGCTCCATGTACCTCTTCTTTCATTTGGGGCAACAGACCCTACCCTATCTTCTCTGCAGTTTCCATATTTTGTCCGAACCACGCACAGCGACTATTTTCAGATGTATGCAATTGCAGACATTGTTGATTTTTATAGATGGAGACAAGTAATTGCCATTTATGTAGATGATGATTATGGAAGAAACGGCATTTCAATACTCGGAGATGCGCTAGCAAAGAAACGTGGCAAGATATCTTACAAAGCCGCATTATCTCCTGGAGCCACCAAGAATGATATAAGTATCTTGCTAAATAGTGTGAACTTAATGGAATCAAGAGTCTTTGTTGTTCATGTTAATCCCGATTATGGTTTGAATATTTTTTCTACTGCCAAGAATCTTGGAATGATGACTAGTGGTTATGTGTGGATTGCAACAGATTGGCTTCCTTCAAAGTTGGATTCAATGGATCCAGTTGATACTAACACATTGAAACTCCTTCAAGGTGTTGTAGCTTTGAGGCATCACACTCCTGATACAAATCTCAAAAAGAGTTTTTTCTCTAGGTTGAAGAACGTAAATGGCACGGAAACTACAAGCTTCAATTCTTATGCTTTATATGCATATGATTCTGTCTGGTTAGCAGCTTATGCTCTTGATGCTTTTCTCAAAGAAGGTGGAAACATATCTTTCTCATCTGACCCTAAGCTGATTGACACAAAAGGAAGCATGTTGCATTTGTCTTCGCTTCGCGTTTTCAATGGCGGTCCGGACTTTCTCCCTACACTTTTGAGAATGAATTTCACTGGTTTGAGTGGTCAGATTCAGTTCAATGGAGACAAGAATCTAATTCGTCCATCATATGATATCCTTAACATCGGTGAATCTGGTTCCCGGAGAGTCGGTTATTGGTCTAATTACTCCGGTCTATCAGTTTTAGCTCCTGAAATTTTGTACAAGAGACCACCTAACACTTCAATAAGCAACCAAAAACTGTTCAATGTTCTGTGGCCTGGAGAAACTATAGCTACACCAAGAGGATGGGTTTTCCCAAACAATGGAAAGCCTTTGAGAATAGCAGTGCCTCACAGAATAAGCTACCTCGAGTTTGTTTCTAAGGACAAGAATCCACCAGGAGTTAGAGGCTATTGCATTGATATCTTTGAAGCAGCCATAAACTTGTTGCCTTATCCTGTTCCGCGACAATATATATTATTCGGAGATGGTAAAAGAAATCCCGACTACAGCCAGCTTGTCAATCAGGTTGCACTAAATAACTTTGATGCAGCTGTTGGAGATGTTACAATTGTCCCAAACAGAACAAGGATTTTGGATTTCACTCAACCTTTCATGGAATCAGGGCTGGTAGTTGTTGTTCCTGTTAAGGAGATCAAATCAAGCCCTTGGGCTTTCCTCAAACCATTCACTGCTCAAATGTGGTGTGTTACCGGCGCCTTTTTCCTTTTTGTTGGAGCTGTTGTATGGATTCTTGAGCACAGGCACAATCCGGAGTTCCGAGGTCCACCCAAGAAGCAAATTATGACAATCTTTTGGTTTACTTTCTCAACAATGTTTTTCTCACACAGAGAAAACACTGTGAGTGGTCTCGGGAGATTTGTGCTAATCATATGGCTTTTTGTAGTATTAATTATCAATTCAAGCTACACAGCAAGCTTAACATCCATCCTCACAGTGCAGCAACTATCCTCACAAATTGAAGGAATTGACAGCTTGATATCAGGTAATCAACCAATTGGAATTCAAGACGGTTCATTTGCAAGAAGGTATCTGATAGATGAACTCAATATACAACCATCTAGGATAGTTTCATTGAGAGATCCAAAGGTATATGAGGATGCCCTTACGCGTGGACCGAATGGAGGAGGGGTTGTAGCTATTGTTGATGAGCTTCCTTATATTGAACTCTTTATGTCGAGTGCCAACTGCAAGTTCAGAACCGTTGGAAATGTGTTCACTAAAAGTGGTTGGGGATTTGGATTCCAGAGGGACTCTCCTCTTGCTATTGATATGTCAACTGCAATTCTTCAACTCTCAGAAAACGGTGACCTGCAAAAGATCCACGACAAATGGCTTTCAAGACAGAACTGTGGCGCAAAAGTTGACGACACTGATTCAAATGAACTCTCTCTTAAAAGCTTCTGGGGTCTCTTTCTTATATGTGGCATTGCATGTCTCATTGCTTTGATTGCATTCTTTGTTAGAGTGTTCTGTCAATACATGAAATTCATCCCAGAGAGTGACATGGAACTTGACCAGGAAAATCCATCACCCAGGCCAAGAAAAACTTTTCGATCTTCGAGAAGTTTCAAAGACTTGATTGTATTTGTGGATAAGAGAGAAAGAGAAATCAAGGATATACTTAGGCAGAAGAGTAAGAAAAGGAGACGGGACCAGAGCTTAGATGATCAATTTAATTCACTTACCTAA 2796 0.3988 MEVLGVKGFVLLFFCLWIPNEVVAIIGNSTVSSRPTVVKIGALFTVDSVIGRSAQQGIKTAIDDVNANKTILPGIKMDVIFHDTNCSGFIGTVEALQLMENEVIATIGPQSSGIAHIIAHVANELHVPLLSFGATDPTLSSLQFPYFVRTTHSDYFQMYAIADIVDFYRWRQVIAIYVDDDYGRNGISILGDALAKKRGKISYKAALSPGATKNDISILLNSVNLMESRVFVVHVNPDYGLNIFSTAKNLGMMTSGYVWIATDWLPSKLDSMDPVDTNTLKLLQGVVALRHHTPDTNLKKSFFSRLKNVNGTETTSFNSYALYAYDSVWLAAYALDAFLKEGGNISFSSDPKLIDTKGSMLHLSSLRVFNGGPDFLPTLLRMNFTGLSGQIQFNGDKNLIRPSYDILNIGESGSRRVGYWSNYSGLSVLAPEILYKRPPNTSISNQKLFNVLWPGETIATPRGWVFPNNGKPLRIAVPHRISYLEFVSKDKNPPGVRGYCIDIFEAAINLLPYPVPRQYILFGDGKRNPDYSQLVNQVALNNFDAAVGDVTIVPNRTRILDFTQPFMESGLVVVVPVKEIKSSPWAFLKPFTAQMWCVTGAFFLFVGAVVWILEHRHNPEFRGPPKKQIMTIFWFTFSTMFFSHRENTVSGLGRFVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISGNQPIGIQDGSFARRYLIDELNIQPSRIVSLRDPKVYEDALTRGPNGGGVVAIVDELPYIELFMSSANCKFRTVGNVFTKSGWGFGFQRDSPLAIDMSTAILQLSENGDLQKIHDKWLSRQNCGAKVDDTDSNELSLKSFWGLFLICGIACLIALIAFFVRVFCQYMKFIPESDMELDQENPSPRPRKTFRSSRSFKDLIVFVDKREREIKDILRQKSKKRRRDQSLDDQFNSLT 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03507 931 CDD PBP1_GABAb_receptor_plant 39 428 IPR044440 -
Mepo6g03507 931 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 881 IPR015683 -
Mepo6g03507 931 FunFam Glutamate receptor 468 584 - -
Mepo6g03507 931 Pfam Ligand-gated ion channel 816 847 IPR001320 GO:0015276|GO:0016020
Mepo6g03507 931 SUPERFAMILY Periplasmic binding protein-like II 449 815 - -
Mepo6g03507 931 Coils Coil 899 919 - -
Mepo6g03507 931 FunFam Glutamate receptor 153 323 - -
Mepo6g03507 931 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 324 336 - -
Mepo6g03507 931 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 51 67 - -
Mepo6g03507 931 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 111 139 - -
Mepo6g03507 931 SUPERFAMILY Periplasmic binding protein-like I 33 465 IPR028082 -
Mepo6g03507 931 Gene3D - 58 401 - -
Mepo6g03507 931 Gene3D - 468 584 - -
Mepo6g03507 931 FunFam Glutamate receptor 710 818 - -
Mepo6g03507 931 Pfam Bacterial extracellular solute-binding proteins, family 3 528 815 IPR001638 -
Mepo6g03507 931 Pfam Receptor family ligand binding region 55 409 IPR001828 -
Mepo6g03507 931 Gene3D - 760 821 - -
Mepo6g03507 931 PIRSF IGluLR_plant 5 930 IPR017103 -
Mepo6g03507 931 Gene3D - 153 426 - -
Mepo6g03507 931 FunFam Glutamate receptor 584 714 - -
Mepo6g03507 931 CDD GluR_Plant 471 814 - -
Mepo6g03507 931 Gene3D - 585 703 - -
Mepo6g03507 931 SMART GluR_14 474 816 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03507 Mepo-Chr6 47260918 47265511 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03507 34 785 Ion Channels AT1G05200 69.180 0.0 1120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03507 K05387 - gmx:100799912 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03507 6 47260918 47265511 Mepo6g03507 6 47260918 47265511 ECH